Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SNORA67.1-201ENST00000364749 141 ntBASIC2.66□□□□□ -1.98
PCNAP12004 RNU6-487P-201ENST00000365430 104 ntBASIC2.66□□□□□ -1.98
PCNAP12004 SNORA44-201ENST00000384584 132 ntBASIC2.66□□□□□ -1.98
PCNAP12004 MIR592-201ENST00000384959 97 ntBASIC2.66□□□□□ -1.98
PCNAP12004 AC007064.1-201ENST00000412238 351 ntBASIC2.66□□□□□ -1.98
PCNAP12004 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.66□□□□□ -1.98
PCNAP12004 AL133396.1-201ENST00000432048 687 ntBASIC2.66□□□□□ -1.98
PCNAP12004 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.66□□□□□ -1.98
PCNAP12004 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.66□□□□□ -1.98
PCNAP12004 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.66□□□□□ -1.98
PCNAP12004 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.66□□□□□ -1.98
PCNAP12004 SMURF2P1-201ENST00000514992 481 ntBASIC2.66□□□□□ -1.98
PCNAP12004 RNU6-559P-201ENST00000516151 98 ntBASIC2.66□□□□□ -1.98
PCNAP12004 Y_RNA.670-201ENST00000516255 105 ntBASIC2.66□□□□□ -1.98
PCNAP12004 RNU6-1016P-201ENST00000516689 94 ntBASIC2.66□□□□□ -1.98
PCNAP12004 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.66□□□□□ -1.98
PCNAP12004 MIR5194-201ENST00000582634 120 ntBASIC2.66□□□□□ -1.98
PCNAP12004 MIR3605-201ENST00000583214 100 ntBASIC2.66□□□□□ -1.98
PCNAP12004 AC018462.2-201ENST00000605375 395 ntBASIC2.66□□□□□ -1.98
PCNAP12004 uc_338.14-201ENST00000613162 166 ntBASIC2.66□□□□□ -1.98
PCNAP12004 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.66□□□□□ -1.98
PCNAP12004 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PCNAP12004 AC099654.5-201ENST00000636479 350 ntBASIC2.66□□□□□ -1.98
PCNAP12004 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
PCNAP12004 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PCNAP12004 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PCNAP12004 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PCNAP12004 AL359854.1-201ENST00000614203 1594 ntBASIC2.66□□□□□ -1.98
PCNAP12004 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.65□□□□□ -1.98
PCNAP12004 RNU6-212P-201ENST00000362642 104 ntBASIC2.65□□□□□ -1.99
PCNAP12004 Y_RNA.123-201ENST00000363338 102 ntBASIC2.65□□□□□ -1.99
PCNAP12004 SNORA68.1-201ENST00000364537 132 ntBASIC2.65□□□□□ -1.99
PCNAP12004 SNORD32A-201ENST00000364805 84 ntBASIC2.65□□□□□ -1.99
PCNAP12004 RNU6-1083P-201ENST00000384022 107 ntBASIC2.65□□□□□ -1.99
PCNAP12004 RNU6-842P-201ENST00000384269 107 ntBASIC2.65□□□□□ -1.99
PCNAP12004 RNU6-43P-201ENST00000384302 107 ntBASIC2.65□□□□□ -1.99
PCNAP12004 MIR218-1-201ENST00000384999 110 ntBASIC2.65□□□□□ -1.99
PCNAP12004 Y_RNA.594-201ENST00000410373 140 ntBASIC2.65□□□□□ -1.99
PCNAP12004 NCOR1P3-201ENST00000420479 303 ntBASIC2.65□□□□□ -1.99
PCNAP12004 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.65□□□□□ -1.99
PCNAP12004 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.65□□□□□ -1.99
PCNAP12004 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.65□□□□□ -1.99
PCNAP12004 RPS15AP7-201ENST00000439294 405 ntBASIC2.65□□□□□ -1.99
PCNAP12004 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.65□□□□□ -1.99
PCNAP12004 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.65□□□□□ -1.99
PCNAP12004 S100A11P2-201ENST00000467589 312 ntBASIC2.65□□□□□ -1.99
PCNAP12004 FO393415.2-201ENST00000480085 343 ntBASIC2.65□□□□□ -1.99
PCNAP12004 RPL7P42-201ENST00000481005 679 ntBASIC2.65□□□□□ -1.99
PCNAP12004 SCARNA11.3-201ENST00000517276 130 ntBASIC2.65□□□□□ -1.99
PCNAP12004 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.65□□□□□ -1.99
PCNAP12004 CKS1BP7-201ENST00000522230 235 ntBASIC2.65□□□□□ -1.99
PCNAP12004 APOOP3-201ENST00000536787 586 ntBASIC2.65□□□□□ -1.99
PCNAP12004 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.65□□□□□ -1.99
PCNAP12004 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.65□□□□□ -1.99
PCNAP12004 VN1R107P-201ENST00000601784 209 ntBASIC2.65□□□□□ -1.99
PCNAP12004 AC093732.2-201ENST00000607950 274 ntBASIC2.65□□□□□ -1.99
PCNAP12004 AC009229.3-201ENST00000608056 282 ntBASIC2.65□□□□□ -1.99
PCNAP12004 AL137790.1-201ENST00000634283 177 ntBASIC2.65□□□□□ -1.99
PCNAP12004 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PCNAP12004 Z75746.1-201ENST00000440243 2080 ntBASIC2.65□□□□□ -1.99
PCNAP12004 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.65□□□□□ -1.99
PCNAP12004 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PCNAP12004 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PCNAP12004 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.64□□□□□ -1.99
PCNAP12004 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCNAP12004 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCNAP12004 RNU6-227P-201ENST00000362865 103 ntBASIC2.64□□□□□ -1.99
PCNAP12004 SNORD114-19-201ENST00000363072 75 ntBASIC2.64□□□□□ -1.99
PCNAP12004 U8.8-201ENST00000365399 135 ntBASIC2.64□□□□□ -1.99
PCNAP12004 MT-TD-201ENST00000387419 68 ntBASIC2.64□□□□□ -1.99
PCNAP12004 SNORA48.2-201ENST00000390926 124 ntBASIC2.64□□□□□ -1.99
PCNAP12004 RNA5SP390-201ENST00000410191 113 ntBASIC2.64□□□□□ -1.99
PCNAP12004 AP000275.1-201ENST00000411943 390 ntBASIC2.64□□□□□ -1.99
PCNAP12004 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.64□□□□□ -1.99
PCNAP12004 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.64□□□□□ -1.99
PCNAP12004 MTND3P23-201ENST00000431980 347 ntBASIC2.64□□□□□ -1.99
PCNAP12004 AC087499.2-201ENST00000432861 149 ntBASIC2.64□□□□□ -1.99
PCNAP12004 AC124916.1-201ENST00000444020 547 ntBASIC2.64□□□□□ -1.99
PCNAP12004 AC011753.1-201ENST00000451001 220 ntBASIC2.64□□□□□ -1.99
PCNAP12004 Y_RNA.632-201ENST00000459189 102 ntBASIC2.64□□□□□ -1.99
PCNAP12004 snoU13.22-201ENST00000459428 104 ntBASIC2.64□□□□□ -1.99
PCNAP12004 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.64□□□□□ -1.99
PCNAP12004 AC096576.1-201ENST00000489014 359 ntBASIC2.64□□□□□ -1.99
PCNAP12004 AC008549.1-201ENST00000512900 643 ntBASIC2.64□□□□□ -1.99
PCNAP12004 RNA5SP82-201ENST00000516707 92 ntBASIC2.64□□□□□ -1.99
PCNAP12004 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.64□□□□□ -1.99
PCNAP12004 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.64□□□□□ -1.99
PCNAP12004 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.64□□□□□ -1.99
PCNAP12004 AC109446.1-201ENST00000566172 220 ntBASIC2.64□□□□□ -1.99
PCNAP12004 MIR3199-1-201ENST00000582434 88 ntBASIC2.64□□□□□ -1.99
PCNAP12004 RNU6-91P-201ENST00000607774 107 ntBASIC2.64□□□□□ -1.99
PCNAP12004 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.64□□□□□ -1.99
PCNAP12004 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.64□□□□□ -1.99
PCNAP12004 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.64□□□□□ -1.99
PCNAP12004 KPNA2P1-201ENST00000458289 1591 ntBASIC2.64□□□□□ -1.99
PCNAP12004 AC009541.1-201ENST00000438279 2662 ntBASIC2.64□□□□□ -1.99
PCNAP12004 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
PCNAP12004 Y_RNA.48-201ENST00000362710 103 ntBASIC2.63□□□□□ -1.99
PCNAP12004 Y_RNA.404-201ENST00000383978 102 ntBASIC2.63□□□□□ -1.99
PCNAP12004 Y_RNA.482-201ENST00000384377 111 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms