Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.31□□□□□ -2.2
CD28P10747 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.31□□□□□ -2.2
CD28P10747 AC115990.1-201ENST00000526957 301 ntBASIC1.31□□□□□ -2.2
CD28P10747 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.31□□□□□ -2.2
CD28P10747 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.31□□□□□ -2.2
CD28P10747 BNIP3P16-201ENST00000589779 534 ntBASIC1.31□□□□□ -2.2
CD28P10747 AC008945.2-201ENST00000606056 604 ntBASIC1.31□□□□□ -2.2
CD28P10747 AC109347.2-201ENST00000610220 349 ntBASIC1.31□□□□□ -2.2
CD28P10747 AC099842.1-201ENST00000619919 596 ntBASIC1.31□□□□□ -2.2
CD28P10747 AC022418.1-201ENST00000624118 445 ntBASIC1.31□□□□□ -2.2
CD28P10747 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
CD28P10747 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CD28P10747 AC006026.1-201ENST00000444025 1803 ntBASIC1.31□□□□□ -2.2
CD28P10747 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CD28P10747 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
CD28P10747 snoU2_19.1-201ENST00000362361 80 ntBASIC1.3□□□□□ -2.2
CD28P10747 Y_RNA.99-201ENST00000363138 105 ntBASIC1.3□□□□□ -2.2
CD28P10747 SNORD32B-201ENST00000364460 84 ntBASIC1.3□□□□□ -2.2
CD28P10747 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CD28P10747 SNORA67.5-201ENST00000391036 107 ntBASIC1.3□□□□□ -2.2
CD28P10747 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.3□□□□□ -2.2
CD28P10747 RPS29P13-201ENST00000402041 169 ntBASIC1.3□□□□□ -2.2
CD28P10747 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.3□□□□□ -2.2
CD28P10747 SNORD56-201ENST00000413522 71 ntBASIC1.3□□□□□ -2.2
CD28P10747 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.3□□□□□ -2.2
CD28P10747 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.3□□□□□ -2.2
CD28P10747 BX510359.4-201ENST00000423750 193 ntBASIC1.3□□□□□ -2.2
CD28P10747 AL591043.1-201ENST00000432461 424 ntBASIC1.3□□□□□ -2.2
CD28P10747 AC243964.1-201ENST00000441814 261 ntBASIC1.3□□□□□ -2.2
CD28P10747 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.3□□□□□ -2.2
CD28P10747 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.3□□□□□ -2.2
CD28P10747 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.3□□□□□ -2.2
CD28P10747 AL122001.1-201ENST00000457027 370 ntBASIC1.3□□□□□ -2.2
CD28P10747 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.3□□□□□ -2.2
CD28P10747 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.3□□□□□ -2.2
CD28P10747 MTND2P33-201ENST00000506452 1031 ntBASIC1.3□□□□□ -2.2
CD28P10747 AC109479.2-201ENST00000517842 174 ntBASIC1.3□□□□□ -2.2
CD28P10747 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.3□□□□□ -2.2
CD28P10747 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.3□□□□□ -2.2
CD28P10747 AC145350.1-201ENST00000567426 208 ntBASIC1.3□□□□□ -2.2
CD28P10747 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.3□□□□□ -2.2
CD28P10747 AC243960.4-201ENST00000600532 288 ntBASIC1.3□□□□□ -2.2
CD28P10747 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.3□□□□□ -2.2
CD28P10747 RMST_6.1-201ENST00000611980 203 ntBASIC1.3□□□□□ -2.2
CD28P10747 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CD28P10747 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.3□□□□□ -2.2
CD28P10747 AC009161.2-201ENST00000624626 138 ntBASIC1.3□□□□□ -2.2
CD28P10747 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CD28P10747 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.3□□□□□ -2.2
CD28P10747 RNU1-58P-201ENST00000362413 163 ntBASIC1.29□□□□□ -2.2
CD28P10747 RNU6-1303P-201ENST00000364841 107 ntBASIC1.29□□□□□ -2.2
CD28P10747 Y_RNA.480-201ENST00000384364 102 ntBASIC1.29□□□□□ -2.2
CD28P10747 RNU6-1127P-201ENST00000384580 107 ntBASIC1.29□□□□□ -2.2
CD28P10747 RNA5SP212-201ENST00000391223 107 ntBASIC1.29□□□□□ -2.2
CD28P10747 Y_RNA.597-201ENST00000410463 100 ntBASIC1.29□□□□□ -2.2
CD28P10747 AC009310.1-201ENST00000414414 451 ntBASIC1.29□□□□□ -2.2
CD28P10747 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.29□□□□□ -2.2
CD28P10747 AL117339.3-201ENST00000418733 162 ntBASIC1.29□□□□□ -2.2
CD28P10747 RPS6P15-201ENST00000431996 751 ntBASIC1.29□□□□□ -2.2
CD28P10747 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.29□□□□□ -2.2
CD28P10747 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.29□□□□□ -2.2
CD28P10747 RNU6-333P-201ENST00000459117 107 ntBASIC1.29□□□□□ -2.2
CD28P10747 MTND3P7-201ENST00000474435 343 ntBASIC1.29□□□□□ -2.2
CD28P10747 AC079382.1-201ENST00000493346 557 ntBASIC1.29□□□□□ -2.2
CD28P10747 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.29□□□□□ -2.2
CD28P10747 AC009646.1-201ENST00000510455 318 ntBASIC1.29□□□□□ -2.2
CD28P10747 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.29□□□□□ -2.2
CD28P10747 RNU2-69P-201ENST00000516061 100 ntBASIC1.29□□□□□ -2.2
CD28P10747 RNU6-1178P-201ENST00000516674 107 ntBASIC1.29□□□□□ -2.2
CD28P10747 SNORA25.17-201ENST00000517184 124 ntBASIC1.29□□□□□ -2.2
CD28P10747 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.29□□□□□ -2.2
CD28P10747 AC104581.2-201ENST00000572227 430 ntBASIC1.29□□□□□ -2.2
CD28P10747 AC137800.2-201ENST00000574375 120 ntBASIC1.29□□□□□ -2.2
CD28P10747 AC004908.3-201ENST00000610248 625 ntBASIC1.29□□□□□ -2.2
CD28P10747 AC091304.6-201ENST00000619761 202 ntBASIC1.29□□□□□ -2.2
CD28P10747 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.29□□□□□ -2.2
CD28P10747 MIR1248-201ENST00000629190 106 ntBASIC1.29□□□□□ -2.2
CD28P10747 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
CD28P10747 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.28□□□□□ -2.2
CD28P10747 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CD28P10747 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CD28P10747 RNU4-15P-201ENST00000362613 141 ntBASIC1.28□□□□□ -2.2
CD28P10747 RNU6-181P-201ENST00000363225 107 ntBASIC1.28□□□□□ -2.2
CD28P10747 U3.4-201ENST00000363352 213 ntBASIC1.28□□□□□ -2.2
CD28P10747 RNU6-234P-201ENST00000365229 104 ntBASIC1.28□□□□□ -2.2
CD28P10747 Y_RNA.399-201ENST00000383955 105 ntBASIC1.28□□□□□ -2.2
CD28P10747 MIR544A-201ENST00000384855 91 ntBASIC1.28□□□□□ -2.2
CD28P10747 SNORA16.2-201ENST00000390991 127 ntBASIC1.28□□□□□ -2.2
CD28P10747 SNORA26.3-201ENST00000391119 136 ntBASIC1.28□□□□□ -2.2
CD28P10747 AL033519.2-201ENST00000403958 392 ntBASIC1.28□□□□□ -2.2
CD28P10747 AL356432.1-201ENST00000405809 419 ntBASIC1.28□□□□□ -2.2
CD28P10747 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.28□□□□□ -2.2
CD28P10747 AP1B1P2-201ENST00000416196 106 ntBASIC1.28□□□□□ -2.2
CD28P10747 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.28□□□□□ -2.2
CD28P10747 UBE2V1P4-201ENST00000425374 344 ntBASIC1.28□□□□□ -2.2
CD28P10747 AC244505.5-201ENST00000443639 207 ntBASIC1.28□□□□□ -2.2
CD28P10747 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.28□□□□□ -2.2
CD28P10747 AC132479.1-201ENST00000449160 144 ntBASIC1.28□□□□□ -2.2
CD28P10747 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.28□□□□□ -2.2
CD28P10747 RPS29P15-201ENST00000458329 171 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms