Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.94□□□□□ -1.46
CHGAP10645 SNORD11B-201ENST00000607707 90 ntBASIC5.94□□□□□ -1.46
CHGAP10645 MIR6868-201ENST00000611215 58 ntBASIC5.94□□□□□ -1.46
CHGAP10645 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHGAP10645 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHGAP10645 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.94□□□□□ -1.46
CHGAP10645 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.94□□□□□ -1.46
CHGAP10645 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHGAP10645 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CHGAP10645 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHGAP10645 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.93□□□□□ -1.46
CHGAP10645 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHGAP10645 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
CHGAP10645 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CHGAP10645 SNORA63.1-201ENST00000362493 131 ntBASIC5.93□□□□□ -1.46
CHGAP10645 Y_RNA.261-201ENST00000364631 102 ntBASIC5.93□□□□□ -1.46
CHGAP10645 MIR449B-201ENST00000384995 97 ntBASIC5.93□□□□□ -1.46
CHGAP10645 AL031003.1-201ENST00000404229 172 ntBASIC5.93□□□□□ -1.46
CHGAP10645 YPEL5P1-201ENST00000419731 367 ntBASIC5.93□□□□□ -1.46
CHGAP10645 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.93□□□□□ -1.46
CHGAP10645 RNU6-513P-201ENST00000516104 104 ntBASIC5.93□□□□□ -1.46
CHGAP10645 DEFB131C-201ENST00000528817 165 ntBASIC5.93□□□□□ -1.46
CHGAP10645 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.93□□□□□ -1.46
CHGAP10645 RNU6-91P-201ENST00000607774 107 ntBASIC5.93□□□□□ -1.46
CHGAP10645 PCGEM1.1-201ENST00000613431 131 ntBASIC5.93□□□□□ -1.46
CHGAP10645 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.93□□□□□ -1.46
CHGAP10645 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
CHGAP10645 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHGAP10645 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.93□□□□□ -1.46
CHGAP10645 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHGAP10645 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC5.92□□□□□ -1.46
CHGAP10645 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHGAP10645 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.92□□□□□ -1.46
CHGAP10645 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.92□□□□□ -1.46
CHGAP10645 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.92□□□□□ -1.46
CHGAP10645 SNORD115-30-201ENST00000364117 82 ntBASIC5.92□□□□□ -1.46
CHGAP10645 MIR539-201ENST00000365690 78 ntBASIC5.92□□□□□ -1.46
CHGAP10645 AL355497.1-201ENST00000406262 551 ntBASIC5.92□□□□□ -1.46
CHGAP10645 MIR1179-201ENST00000408703 91 ntBASIC5.92□□□□□ -1.46
CHGAP10645 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.92□□□□□ -1.46
CHGAP10645 SNORA25.12-201ENST00000516202 82 ntBASIC5.92□□□□□ -1.46
CHGAP10645 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.92□□□□□ -1.46
CHGAP10645 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHGAP10645 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHGAP10645 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.92□□□□□ -1.46
CHGAP10645 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHGAP10645 MAPK10-349ENST00000641767 3661 ntBASIC5.92□□□□□ -1.46
CHGAP10645 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHGAP10645 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHGAP10645 snoU2_19.4-201ENST00000364329 80 ntBASIC5.91□□□□□ -1.46
CHGAP10645 Y_RNA.293-201ENST00000364908 93 ntBASIC5.91□□□□□ -1.46
CHGAP10645 RNA5SP201-201ENST00000410316 124 ntBASIC5.91□□□□□ -1.46
CHGAP10645 AL135790.2-201ENST00000437701 267 ntBASIC5.91□□□□□ -1.46
CHGAP10645 AL353748.1-201ENST00000440753 474 ntBASIC5.91□□□□□ -1.46
CHGAP10645 AC006445.2-201ENST00000510061 472 ntBASIC5.91□□□□□ -1.46
CHGAP10645 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.91□□□□□ -1.46
CHGAP10645 RNU6-971P-201ENST00000516920 106 ntBASIC5.91□□□□□ -1.46
CHGAP10645 MIR3609-201ENST00000582661 80 ntBASIC5.91□□□□□ -1.46
CHGAP10645 MIR5684-201ENST00000585074 65 ntBASIC5.91□□□□□ -1.46
CHGAP10645 Y_RNA.802-201ENST00000614892 130 ntBASIC5.91□□□□□ -1.46
CHGAP10645 TCL6_2.1-201ENST00000615162 119 ntBASIC5.91□□□□□ -1.46
CHGAP10645 AC005562.2-201ENST00000618264 111 ntBASIC5.91□□□□□ -1.46
CHGAP10645 AC068205.3-201ENST00000636385 468 ntBASIC5.91□□□□□ -1.46
CHGAP10645 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHGAP10645 AC093591.2-201ENST00000565254 3843 ntBASIC5.91□□□□□ -1.46
CHGAP10645 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHGAP10645 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
CHGAP10645 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.9□□□□□ -1.46
CHGAP10645 AC134026.1-201ENST00000623249 2239 ntBASIC5.9□□□□□ -1.46
CHGAP10645 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHGAP10645 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHGAP10645 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CHGAP10645 Y_RNA.337-201ENST00000365312 102 ntBASIC5.9□□□□□ -1.46
CHGAP10645 SNORA72.4-201ENST00000384174 132 ntBASIC5.9□□□□□ -1.46
CHGAP10645 RNU6-748P-201ENST00000384648 107 ntBASIC5.9□□□□□ -1.46
CHGAP10645 AC114982.1-201ENST00000469402 321 ntBASIC5.9□□□□□ -1.46
CHGAP10645 RNU6-1333P-201ENST00000516162 93 ntBASIC5.9□□□□□ -1.46
CHGAP10645 SNORD19.2-201ENST00000516978 73 ntBASIC5.9□□□□□ -1.46
CHGAP10645 EIF4A1P12-201ENST00000551910 141 ntBASIC5.9□□□□□ -1.46
CHGAP10645 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.9□□□□□ -1.46
CHGAP10645 AC018692.3-201ENST00000623929 123 ntBASIC5.9□□□□□ -1.46
CHGAP10645 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
CHGAP10645 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHGAP10645 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CHGAP10645 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.9□□□□□ -1.47
CHGAP10645 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHGAP10645 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHGAP10645 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.89□□□□□ -1.47
CHGAP10645 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.89□□□□□ -1.47
CHGAP10645 AL672296.1-201ENST00000427780 2158 ntBASIC5.89□□□□□ -1.47
CHGAP10645 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC5.89□□□□□ -1.47
CHGAP10645 Y_RNA.71-201ENST00000362892 104 ntBASIC5.89□□□□□ -1.47
CHGAP10645 Y_RNA.243-201ENST00000364481 109 ntBASIC5.89□□□□□ -1.47
CHGAP10645 SNORD116-14-201ENST00000383894 92 ntBASIC5.89□□□□□ -1.47
CHGAP10645 SNORD116-17-201ENST00000383929 92 ntBASIC5.89□□□□□ -1.47
CHGAP10645 SNORD116-15-201ENST00000384445 92 ntBASIC5.89□□□□□ -1.47
CHGAP10645 SNORD116-19-201ENST00000384729 92 ntBASIC5.89□□□□□ -1.47
CHGAP10645 RN7SKP156-201ENST00000410308 342 ntBASIC5.89□□□□□ -1.47
CHGAP10645 PTGES3P4-201ENST00000426243 356 ntBASIC5.89□□□□□ -1.47
CHGAP10645 AC146507.2-201ENST00000460608 476 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms