Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.22□□□□□ -1.73
RARAP10276 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.22□□□□□ -1.73
RARAP10276 AC025627.2-201ENST00000576220 160 ntBASIC4.22□□□□□ -1.73
RARAP10276 AC090897.2-201ENST00000581715 130 ntBASIC4.22□□□□□ -1.73
RARAP10276 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.22□□□□□ -1.73
RARAP10276 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.22□□□□□ -1.73
RARAP10276 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RARAP10276 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RARAP10276 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RARAP10276 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RARAP10276 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RARAP10276 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
RARAP10276 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RARAP10276 RNU6-151P-201ENST00000364158 107 ntBASIC4.21□□□□□ -1.74
RARAP10276 RNU6-622P-201ENST00000384272 103 ntBASIC4.21□□□□□ -1.74
RARAP10276 MIR569-201ENST00000385228 96 ntBASIC4.21□□□□□ -1.74
RARAP10276 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.21□□□□□ -1.74
RARAP10276 RN7SKP53-201ENST00000411337 315 ntBASIC4.21□□□□□ -1.74
RARAP10276 AC019205.3-201ENST00000424573 156 ntBASIC4.21□□□□□ -1.74
RARAP10276 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.21□□□□□ -1.74
RARAP10276 HMGN2P10-201ENST00000448085 265 ntBASIC4.21□□□□□ -1.74
RARAP10276 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.21□□□□□ -1.74
RARAP10276 RPS29P20-201ENST00000489592 171 ntBASIC4.21□□□□□ -1.74
RARAP10276 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.21□□□□□ -1.74
RARAP10276 RPL21P129-201ENST00000491732 478 ntBASIC4.21□□□□□ -1.74
RARAP10276 AC009127.3-201ENST00000570531 403 ntBASIC4.21□□□□□ -1.74
RARAP10276 MIR3939-201ENST00000582614 106 ntBASIC4.21□□□□□ -1.74
RARAP10276 AL356575.1-201ENST00000603008 283 ntBASIC4.21□□□□□ -1.74
RARAP10276 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.21□□□□□ -1.74
RARAP10276 MIR3674-201ENST00000636576 68 ntBASIC4.21□□□□□ -1.74
RARAP10276 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RARAP10276 AC100821.1-201ENST00000523153 2479 ntBASIC4.21□□□□□ -1.74
RARAP10276 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RARAP10276 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RARAP10276 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RARAP10276 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RARAP10276 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
RARAP10276 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RARAP10276 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RARAP10276 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RARAP10276 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.2□□□□□ -1.74
RARAP10276 SNORA60-201ENST00000362396 134 ntBASIC4.2□□□□□ -1.74
RARAP10276 RNU6-600P-201ENST00000362524 99 ntBASIC4.2□□□□□ -1.74
RARAP10276 MIR607-201ENST00000385241 96 ntBASIC4.2□□□□□ -1.74
RARAP10276 HSPE1P12-201ENST00000412576 301 ntBASIC4.2□□□□□ -1.74
RARAP10276 AC012308.1-201ENST00000451232 178 ntBASIC4.2□□□□□ -1.74
RARAP10276 RPL26P9-201ENST00000457466 433 ntBASIC4.2□□□□□ -1.74
RARAP10276 AC090525.1-201ENST00000479116 478 ntBASIC4.2□□□□□ -1.74
RARAP10276 AC010409.1-201ENST00000487382 476 ntBASIC4.2□□□□□ -1.74
RARAP10276 RN7SL271P-201ENST00000487601 295 ntBASIC4.2□□□□□ -1.74
RARAP10276 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.2□□□□□ -1.74
RARAP10276 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.2□□□□□ -1.74
RARAP10276 AC100767.1-201ENST00000528178 123 ntBASIC4.2□□□□□ -1.74
RARAP10276 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.2□□□□□ -1.74
RARAP10276 MIR3684-201ENST00000579779 74 ntBASIC4.2□□□□□ -1.74
RARAP10276 AL034408.1-202ENST00000636088 415 ntBASIC4.2□□□□□ -1.74
RARAP10276 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
RARAP10276 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RARAP10276 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RARAP10276 Y_RNA.329-201ENST00000365209 107 ntBASIC4.19□□□□□ -1.74
RARAP10276 RNU6-487P-201ENST00000365430 104 ntBASIC4.19□□□□□ -1.74
RARAP10276 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.19□□□□□ -1.74
RARAP10276 AC096649.2-201ENST00000416186 393 ntBASIC4.19□□□□□ -1.74
RARAP10276 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.19□□□□□ -1.74
RARAP10276 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.19□□□□□ -1.74
RARAP10276 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RARAP10276 AC026726.1-201ENST00000512859 601 ntBASIC4.19□□□□□ -1.74
RARAP10276 RNA5SP272-201ENST00000516095 111 ntBASIC4.19□□□□□ -1.74
RARAP10276 NACAP3-201ENST00000552100 481 ntBASIC4.19□□□□□ -1.74
RARAP10276 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RARAP10276 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RARAP10276 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RARAP10276 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.19□□□□□ -1.74
RARAP10276 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RARAP10276 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RARAP10276 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RARAP10276 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.19□□□□□ -1.74
RARAP10276 LINC02471-203ENST00000641941 4752 ntBASIC4.18□□□□□ -1.74
RARAP10276 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RARAP10276 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.18□□□□□ -1.74
RARAP10276 MIR423-201ENST00000362201 94 ntBASIC4.18□□□□□ -1.74
RARAP10276 RNU1-62P-201ENST00000362599 164 ntBASIC4.18□□□□□ -1.74
RARAP10276 RNU6-727P-201ENST00000363592 107 ntBASIC4.18□□□□□ -1.74
RARAP10276 RNU6-275P-201ENST00000364910 107 ntBASIC4.18□□□□□ -1.74
RARAP10276 RNU6-763P-201ENST00000390865 106 ntBASIC4.18□□□□□ -1.74
RARAP10276 RNU6-239P-201ENST00000390990 99 ntBASIC4.18□□□□□ -1.74
RARAP10276 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.18□□□□□ -1.74
RARAP10276 VDAC1P3-201ENST00000434069 851 ntBASIC4.18□□□□□ -1.74
RARAP10276 AC010618.1-201ENST00000469924 477 ntBASIC4.18□□□□□ -1.74
RARAP10276 TGIF1P1-201ENST00000558095 802 ntBASIC4.18□□□□□ -1.74
RARAP10276 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.18□□□□□ -1.74
RARAP10276 CYP4A27P-201ENST00000567218 190 ntBASIC4.18□□□□□ -1.74
RARAP10276 AC005255.1-201ENST00000593748 216 ntBASIC4.18□□□□□ -1.74
RARAP10276 MIR6868-201ENST00000611215 58 ntBASIC4.18□□□□□ -1.74
RARAP10276 MIR6758-201ENST00000620653 63 ntBASIC4.18□□□□□ -1.74
RARAP10276 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.18□□□□□ -1.74
RARAP10276 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RARAP10276 AL133383.2-201ENST00000622958 2336 ntBASIC4.18□□□□□ -1.74
RARAP10276 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RARAP10276 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms