Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC104408.1-201ENST00000605241 170 ntBASIC-0.3□□□□□ -2.46
APOBP04114 MIR6738-201ENST00000619620 64 ntBASIC-0.3□□□□□ -2.46
APOBP04114 SCARNA17-201ENST00000516183 144 ntBASIC-0.3□□□□□ -2.46
APOBP04114 SNORA25.12-201ENST00000516202 82 ntBASIC-0.3□□□□□ -2.46
APOBP04114 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.3□□□□□ -2.46
APOBP04114 AL022067.1-201ENST00000602426 454 ntBASIC-0.3□□□□□ -2.46
APOBP04114 AC078938.1-201ENST00000620993 318 ntBASIC-0.3□□□□□ -2.46
APOBP04114 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.3□□□□□ -2.46
APOBP04114 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.3□□□□□ -2.46
APOBP04114 SNORD57-201ENST00000448188 72 ntBASIC-0.3□□□□□ -2.46
APOBP04114 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.3□□□□□ -2.46
APOBP04114 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-0.3□□□□□ -2.46
APOBP04114 AC104985.3-201ENST00000623479 597 ntBASIC-0.3□□□□□ -2.46
APOBP04114 MTND2P41-201ENST00000637599 773 ntBASIC-0.3□□□□□ -2.46
APOBP04114 RNU6-269P-201ENST00000391077 97 ntBASIC-0.31□□□□□ -2.46
APOBP04114 SNORD75.1-201ENST00000408373 60 ntBASIC-0.31□□□□□ -2.46
APOBP04114 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.31□□□□□ -2.46
APOBP04114 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.31□□□□□ -2.46
APOBP04114 YWHAZP8-201ENST00000436935 731 ntBASIC-0.31□□□□□ -2.46
APOBP04114 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.31□□□□□ -2.46
APOBP04114 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.31□□□□□ -2.46
APOBP04114 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.31□□□□□ -2.46
APOBP04114 NAMPTP3-201ENST00000569273 224 ntBASIC-0.31□□□□□ -2.46
APOBP04114 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.31□□□□□ -2.46
APOBP04114 PTGES3P1-201ENST00000439531 483 ntBASIC-0.31□□□□□ -2.46
APOBP04114 AC018868.1-201ENST00000491307 315 ntBASIC-0.31□□□□□ -2.46
APOBP04114 DEFB108D-201ENST00000527787 222 ntBASIC-0.31□□□□□ -2.46
APOBP04114 AC112693.2-201ENST00000556538 232 ntBASIC-0.31□□□□□ -2.46
APOBP04114 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.31□□□□□ -2.46
APOBP04114 AL031667.3-201ENST00000620124 655 ntBASIC-0.31□□□□□ -2.46
APOBP04114 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.31□□□□□ -2.46
APOBP04114 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.31□□□□□ -2.46
APOBP04114 SNORD19.2-201ENST00000516978 73 ntBASIC-0.31□□□□□ -2.46
APOBP04114 AP002004.2-201ENST00000531656 154 ntBASIC-0.31□□□□□ -2.46
APOBP04114 POLR2KP1-201ENST00000553226 168 ntBASIC-0.31□□□□□ -2.46
APOBP04114 AC008759.3-201ENST00000613300 508 ntBASIC-0.31□□□□□ -2.46
APOBP04114 MIR194-1-201ENST00000384892 85 ntBASIC-0.31□□□□□ -2.46
APOBP04114 AC119751.3-201ENST00000399720 670 ntBASIC-0.31□□□□□ -2.46
APOBP04114 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC-0.31□□□□□ -2.46
APOBP04114 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.31□□□□□ -2.46
APOBP04114 RPL26P26-201ENST00000480251 434 ntBASIC-0.31□□□□□ -2.46
APOBP04114 AC111193.1-201ENST00000504097 155 ntBASIC-0.31□□□□□ -2.46
APOBP04114 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-0.31□□□□□ -2.46
APOBP04114 RNVU1-2-201ENST00000516326 135 ntBASIC-0.31□□□□□ -2.46
APOBP04114 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.31□□□□□ -2.46
APOBP04114 AC012065.4-201ENST00000602445 679 ntBASIC-0.31□□□□□ -2.46
APOBP04114 AC015726.2-201ENST00000620112 122 ntBASIC-0.31□□□□□ -2.46
APOBP04114 MIR412-201ENST00000362142 91 ntBASIC-0.32□□□□□ -2.46
APOBP04114 RNA5SP192-201ENST00000364404 120 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AL161935.2-201ENST00000414627 60 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AC007435.1-201ENST00000421086 415 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AC005094.1-201ENST00000440420 368 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AL049734.2-201ENST00000441066 616 ntBASIC-0.32□□□□□ -2.46
APOBP04114 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.32□□□□□ -2.46
APOBP04114 MTND1P15-201ENST00000579262 949 ntBASIC-0.32□□□□□ -2.46
APOBP04114 MIR4743-201ENST00000584576 69 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AP003465.2-201ENST00000602571 373 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AC004908.3-201ENST00000610248 625 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AC090772.4-201ENST00000623599 362 ntBASIC-0.32□□□□□ -2.46
APOBP04114 ZNF849P-201ENST00000594711 1566 ntBASIC-0.32□□□□□ -2.46
APOBP04114 RNA5SP264-201ENST00000363115 107 ntBASIC-0.32□□□□□ -2.46
APOBP04114 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.32□□□□□ -2.46
APOBP04114 RNU7-56P-201ENST00000458744 62 ntBASIC-0.32□□□□□ -2.46
APOBP04114 HMGB1P28-201ENST00000507778 552 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AC104136.1-201ENST00000512969 394 ntBASIC-0.32□□□□□ -2.46
APOBP04114 RNA5SP291-201ENST00000517222 105 ntBASIC-0.32□□□□□ -2.46
APOBP04114 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.32□□□□□ -2.46
APOBP04114 AC009268.1-201ENST00000561352 1203 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AC084824.4-201ENST00000620106 731 ntBASIC-0.32□□□□□ -2.46
APOBP04114 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.32□□□□□ -2.46
APOBP04114 RNU6-140P-201ENST00000384566 108 ntBASIC-0.32□□□□□ -2.46
APOBP04114 SNORA75.3-201ENST00000391231 150 ntBASIC-0.32□□□□□ -2.46
APOBP04114 MIR1283-2-201ENST00000408621 87 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AC099677.2-201ENST00000436385 175 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.32□□□□□ -2.46
APOBP04114 RNU7-21P-201ENST00000459430 62 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AC091021.1-201ENST00000468051 388 ntBASIC-0.32□□□□□ -2.46
APOBP04114 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AC093023.1-201ENST00000547375 507 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AP002906.1-201ENST00000603405 233 ntBASIC-0.32□□□□□ -2.46
APOBP04114 AC024940.5-201ENST00000622889 474 ntBASIC-0.32□□□□□ -2.46
APOBP04114 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
APOBP04114 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
APOBP04114 PRRC2CP1-201ENST00000404428 159 ntBASIC-0.33□□□□□ -2.46
APOBP04114 AC002429.1-201ENST00000437672 148 ntBASIC-0.33□□□□□ -2.46
APOBP04114 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.33□□□□□ -2.46
APOBP04114 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.33□□□□□ -2.46
APOBP04114 AC114811.1-201ENST00000507207 168 ntBASIC-0.33□□□□□ -2.46
APOBP04114 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.33□□□□□ -2.46
APOBP04114 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
APOBP04114 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.33□□□□□ -2.46
APOBP04114 AC027288.2-201ENST00000553028 243 ntBASIC-0.33□□□□□ -2.46
APOBP04114 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.33□□□□□ -2.46
APOBP04114 AC006157.1-201ENST00000611750 366 ntBASIC-0.33□□□□□ -2.46
APOBP04114 RNU6-741P-201ENST00000383889 107 ntBASIC-0.33□□□□□ -2.46
APOBP04114 RNU6-217P-201ENST00000384164 104 ntBASIC-0.33□□□□□ -2.46
APOBP04114 AL512844.2-201ENST00000433990 593 ntBASIC-0.33□□□□□ -2.46
APOBP04114 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.33□□□□□ -2.46
APOBP04114 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms