Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC025465.3-201ENST00000510570 311 ntBASIC0□□□□□ -2.41
SPTA1P02549 AC024589.1-201ENST00000512207 263 ntBASIC0□□□□□ -2.41
SPTA1P02549 RNA5SP168-201ENST00000516642 112 ntBASIC0□□□□□ -2.41
SPTA1P02549 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0□□□□□ -2.41
SPTA1P02549 ARL2BPP5-201ENST00000523141 481 ntBASIC0□□□□□ -2.41
SPTA1P02549 AC104417.1-201ENST00000523974 751 ntBASIC0□□□□□ -2.41
SPTA1P02549 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0□□□□□ -2.41
SPTA1P02549 NACAP3-201ENST00000552100 481 ntBASIC0□□□□□ -2.41
SPTA1P02549 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0□□□□□ -2.41
SPTA1P02549 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
SPTA1P02549 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0□□□□□ -2.41
SPTA1P02549 SEPT14P17-201ENST00000617978 177 ntBASIC0□□□□□ -2.41
SPTA1P02549 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0□□□□□ -2.41
SPTA1P02549 AC004009.2-201ENST00000623016 728 ntBASIC0□□□□□ -2.41
SPTA1P02549 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0□□□□□ -2.41
SPTA1P02549 SNORD114-5-201ENST00000362928 70 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 RNU6-438P-201ENST00000365561 103 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 RNY1P8-201ENST00000383970 114 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 SNORA29-201ENST00000384183 140 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 RNU6-110P-201ENST00000384508 104 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.01□□□□□ -2.41
SPTA1P02549 AC063976.4-201ENST00000421971 163 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.01□□□□□ -2.41
SPTA1P02549 MTND2P4-201ENST00000445034 1004 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.01□□□□□ -2.41
SPTA1P02549 snoU13.25-201ENST00000458945 104 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 RNA5SP135-201ENST00000517019 125 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 BPTFP1-201ENST00000579209 492 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 AC007363.1-201ENST00000604736 620 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 AF129408.1-201ENST00000608767 431 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 AC096586.1-201ENST00000610267 561 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 MTND4P20-201ENST00000424125 869 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 PSMA6P3-201ENST00000428242 164 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.01□□□□□ -2.41
SPTA1P02549 NDUFA5P7-201ENST00000452914 242 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 MTND2P24-201ENST00000453434 806 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 AL441985.1-201ENST00000457727 251 ntBASIC-0.01□□□□□ -2.41
SPTA1P02549 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
SPTA1P02549 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.01□□□□□ -2.41
SPTA1P02549 CCDC58P2-201ENST00000417131 366 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
SPTA1P02549 MTND1P30-201ENST00000441241 901 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.02□□□□□ -2.41
SPTA1P02549 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.02□□□□□ -2.41
SPTA1P02549 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.02□□□□□ -2.41
SPTA1P02549 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 SNORA76.2-201ENST00000517095 137 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.02□□□□□ -2.41
SPTA1P02549 AC097065.2-201ENST00000608159 533 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.02□□□□□ -2.41
SPTA1P02549 7SK.10-201ENST00000621414 298 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 AC011155.2-201ENST00000623202 216 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 AC068647.2-201ENST00000637380 353 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 RNA5SP259-201ENST00000365541 109 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.02□□□□□ -2.41
SPTA1P02549 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.02□□□□□ -2.41
SPTA1P02549 AC022493.2-201ENST00000506122 481 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 AC116347.2-201ENST00000514912 523 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 SNORA68.3-201ENST00000515906 83 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 RNU4-18P-201ENST00000516751 149 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.02□□□□□ -2.41
SPTA1P02549 MIR4782-201ENST00000577987 79 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 AC009237.15-201ENST00000610252 501 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.02□□□□□ -2.41
SPTA1P02549 AC130324.3-201ENST00000614165 542 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 AC092634.7-201ENST00000621022 103 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 AC080188.3-201ENST00000624842 748 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 MIR6516-201ENST00000630554 81 ntBASIC-0.02□□□□□ -2.41
SPTA1P02549 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 RNU6-778P-201ENST00000363269 103 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 AL353621.1-201ENST00000418219 243 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 HMGN2P22-201ENST00000427588 175 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.03□□□□□ -2.41
SPTA1P02549 AL162395.1-201ENST00000457882 422 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 RNA5SP134-201ENST00000516492 96 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 SUMO2P16-201ENST00000519475 264 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 AC018630.3-201ENST00000542637 96 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 AC009712.1-201ENST00000564938 316 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 AP001429.1-201ENST00000602568 530 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 AC104408.1-201ENST00000605241 170 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 AC091946.2-201ENST00000606105 291 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
SPTA1P02549 RNU6-543P-201ENST00000362576 108 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
SPTA1P02549 AL603865.2-201ENST00000401679 213 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.03□□□□□ -2.41
SPTA1P02549 MTND1P3-201ENST00000484956 952 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 RN7SKP256-201ENST00000517201 314 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms