Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SNORA40.2-201ENST00000390847 128 ntBASIC0.46□□□□□ -2.34
IFNA1P01562 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.46□□□□□ -2.34
IFNA1P01562 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.46□□□□□ -2.34
IFNA1P01562 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.46□□□□□ -2.34
IFNA1P01562 TOMM22P6-201ENST00000465035 409 ntBASIC0.46□□□□□ -2.34
IFNA1P01562 RPL39P38-201ENST00000467018 153 ntBASIC0.46□□□□□ -2.34
IFNA1P01562 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.46□□□□□ -2.34
IFNA1P01562 AC008837.2-201ENST00000513076 418 ntBASIC0.46□□□□□ -2.34
IFNA1P01562 Y_RNA.689-201ENST00000516589 107 ntBASIC0.46□□□□□ -2.34
IFNA1P01562 AL590705.4-201ENST00000532209 134 ntBASIC0.46□□□□□ -2.34
IFNA1P01562 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.46□□□□□ -2.34
IFNA1P01562 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.46□□□□□ -2.34
IFNA1P01562 AP001004.1-201ENST00000582468 324 ntBASIC0.46□□□□□ -2.34
IFNA1P01562 AC068620.3-201ENST00000602749 560 ntBASIC0.46□□□□□ -2.34
IFNA1P01562 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.46□□□□□ -2.34
IFNA1P01562 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.46□□□□□ -2.34
IFNA1P01562 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
IFNA1P01562 Y_RNA.140-201ENST00000363474 103 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 SNORA4.2-201ENST00000365313 147 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 RNU6-53P-201ENST00000365367 106 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 RNU6-946P-201ENST00000383878 107 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 RNU6-110P-201ENST00000384508 104 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 MIR520E-201ENST00000384867 87 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 SNORA12.2-201ENST00000391040 156 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.45□□□□□ -2.34
IFNA1P01562 CYCSP33-201ENST00000414485 327 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.45□□□□□ -2.34
IFNA1P01562 RNU7-34P-201ENST00000459394 64 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 RNU4-54P-201ENST00000516428 129 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 RNA5SP121-201ENST00000516537 101 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 RNU6-1028P-201ENST00000517164 93 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
IFNA1P01562 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.45□□□□□ -2.34
IFNA1P01562 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.45□□□□□ -2.34
IFNA1P01562 AP000942.3-201ENST00000603702 160 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 AC105148.1-201ENST00000604961 409 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.45□□□□□ -2.34
IFNA1P01562 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
IFNA1P01562 AL391994.1-201ENST00000254724 282 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 RNU6-621P-201ENST00000364752 109 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 Y_RNA.311-201ENST00000365068 96 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 SNORA18.2-201ENST00000383865 132 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 RNU6-482P-201ENST00000391068 107 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 MIR942-201ENST00000401111 86 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 RPS3AP37-201ENST00000419176 745 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.44□□□□□ -2.34
IFNA1P01562 AC022447.4-201ENST00000504053 364 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 MTCO3P9-201ENST00000506989 781 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.44□□□□□ -2.34
IFNA1P01562 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 MTND3P5-201ENST00000512798 333 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 AC026616.1-201ENST00000523157 525 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.44□□□□□ -2.34
IFNA1P01562 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.44□□□□□ -2.34
IFNA1P01562 MIR3146-201ENST00000580367 79 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.44□□□□□ -2.34
IFNA1P01562 KC877982.1-201ENST00000602313 470 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 AC009229.3-201ENST00000608056 282 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 AC245297.2-201ENST00000610119 565 ntBASIC0.44□□□□□ -2.34
IFNA1P01562 MIR544A-201ENST00000384855 91 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 FGF7P8-201ENST00000402994 292 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 RNA5SP111-201ENST00000411386 101 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 MTND4P3-201ENST00000417829 541 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.43□□□□□ -2.34
IFNA1P01562 CETN4P-201ENST00000432407 469 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 AL591043.1-201ENST00000432461 424 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 AC048334.1-201ENST00000477975 159 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.43□□□□□ -2.34
IFNA1P01562 AC113347.3-201ENST00000509113 148 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 AC108078.2-201ENST00000510750 236 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 SNORD79.1-201ENST00000516069 84 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 RNA5SP216-201ENST00000516111 123 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 RNU6-1041P-201ENST00000516254 102 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.43□□□□□ -2.34
IFNA1P01562 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.43□□□□□ -2.34
IFNA1P01562 SNORA59B-202ENST00000578183 701 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 AP001542.1-201ENST00000591314 200 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 AC106858.1-201ENST00000637497 429 ntBASIC0.43□□□□□ -2.34
IFNA1P01562 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
IFNA1P01562 RNU6-1285P-201ENST00000363480 105 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 RNU6-392P-201ENST00000364926 101 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 RNU4-12P-201ENST00000365233 139 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 RNU5E-6P-201ENST00000365574 115 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 RNU6-224P-201ENST00000384055 107 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 MTND3P20-201ENST00000407663 186 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 USP9YP21-201ENST00000420603 432 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 USP9YP11-201ENST00000427537 717 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.42□□□□□ -2.34
IFNA1P01562 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.42□□□□□ -2.34
IFNA1P01562 AL157398.1-201ENST00000452981 186 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.42□□□□□ -2.34
IFNA1P01562 SUMO2P16-201ENST00000519475 264 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 AP003484.1-201ENST00000530974 250 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.42□□□□□ -2.34
IFNA1P01562 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.42□□□□□ -2.34
IFNA1P01562 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.42□□□□□ -2.34
IFNA1P01562 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.42□□□□□ -2.34
IFNA1P01562 MIR548AC-201ENST00000585049 88 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 HMGN1P30-201ENST00000589286 268 ntBASIC0.42□□□□□ -2.34
IFNA1P01562 BNIP3P26-201ENST00000600827 554 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms