Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
DHFRP00374 AL117342.1-201ENST00000404861 406 ntBASIC0.58□□□□□ -2.32
DHFRP00374 AL356776.1-201ENST00000406574 447 ntBASIC0.58□□□□□ -2.32
DHFRP00374 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
DHFRP00374 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.58□□□□□ -2.32
DHFRP00374 RPL23AP30-201ENST00000432419 501 ntBASIC0.58□□□□□ -2.32
DHFRP00374 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.58□□□□□ -2.32
DHFRP00374 AC006026.2-201ENST00000457376 180 ntBASIC0.58□□□□□ -2.32
DHFRP00374 MTCO3P9-201ENST00000506989 781 ntBASIC0.58□□□□□ -2.32
DHFRP00374 RNA5SP481-201ENST00000516814 122 ntBASIC0.58□□□□□ -2.32
DHFRP00374 AC013828.2-201ENST00000532487 235 ntBASIC0.58□□□□□ -2.32
DHFRP00374 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.58□□□□□ -2.32
DHFRP00374 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.58□□□□□ -2.32
DHFRP00374 AL353778.1-201ENST00000603149 408 ntBASIC0.58□□□□□ -2.32
DHFRP00374 AL451064.1-201ENST00000607718 471 ntBASIC0.58□□□□□ -2.32
DHFRP00374 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.58□□□□□ -2.32
DHFRP00374 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
DHFRP00374 RNU4-15P-201ENST00000362613 141 ntBASIC0.57□□□□□ -2.32
DHFRP00374 RNU6-413P-201ENST00000384115 107 ntBASIC0.57□□□□□ -2.32
DHFRP00374 RNU6-1179P-201ENST00000384667 107 ntBASIC0.57□□□□□ -2.32
DHFRP00374 MIR194-1-201ENST00000384892 85 ntBASIC0.57□□□□□ -2.32
DHFRP00374 HMGN1P14-201ENST00000412459 517 ntBASIC0.57□□□□□ -2.32
DHFRP00374 MTCO3P41-201ENST00000414801 328 ntBASIC0.57□□□□□ -2.32
DHFRP00374 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.57□□□□□ -2.32
DHFRP00374 AC007969.2-201ENST00000441891 191 ntBASIC0.57□□□□□ -2.32
DHFRP00374 RAP1BP2-201ENST00000478270 544 ntBASIC0.57□□□□□ -2.32
DHFRP00374 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.57□□□□□ -2.32
DHFRP00374 ATP5EP1-201ENST00000510257 156 ntBASIC0.57□□□□□ -2.32
DHFRP00374 MTCO3P28-201ENST00000513351 515 ntBASIC0.57□□□□□ -2.32
DHFRP00374 RNA5SP102-201ENST00000516865 106 ntBASIC0.57□□□□□ -2.32
DHFRP00374 RNA5SP503-201ENST00000517047 117 ntBASIC0.57□□□□□ -2.32
DHFRP00374 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.57□□□□□ -2.32
DHFRP00374 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.57□□□□□ -2.32
DHFRP00374 MIR548AC-201ENST00000585049 88 ntBASIC0.57□□□□□ -2.32
DHFRP00374 AC008751.2-201ENST00000597885 980 ntBASIC0.57□□□□□ -2.32
DHFRP00374 MIR3976-201ENST00000606807 139 ntBASIC0.57□□□□□ -2.32
DHFRP00374 AC104073.3-201ENST00000610942 955 ntBASIC0.57□□□□□ -2.32
DHFRP00374 AC083806.3-201ENST00000614016 455 ntBASIC0.57□□□□□ -2.32
DHFRP00374 U6.42-201ENST00000618440 107 ntBASIC0.57□□□□□ -2.32
DHFRP00374 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.57□□□□□ -2.32
DHFRP00374 MIR6835-201ENST00000621552 64 ntBASIC0.57□□□□□ -2.32
DHFRP00374 AC126544.2-201ENST00000625174 749 ntBASIC0.57□□□□□ -2.32
DHFRP00374 AC068647.2-201ENST00000637380 353 ntBASIC0.57□□□□□ -2.32
DHFRP00374 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
DHFRP00374 RNU6-862P-201ENST00000362804 105 ntBASIC0.56□□□□□ -2.32
DHFRP00374 SNORA63D-201ENST00000364359 132 ntBASIC0.56□□□□□ -2.32
DHFRP00374 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
DHFRP00374 RNU2-62P-201ENST00000410868 191 ntBASIC0.56□□□□□ -2.32
DHFRP00374 CYCSP33-201ENST00000414485 327 ntBASIC0.56□□□□□ -2.32
DHFRP00374 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.56□□□□□ -2.32
DHFRP00374 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.56□□□□□ -2.32
DHFRP00374 AC007327.1-201ENST00000447461 264 ntBASIC0.56□□□□□ -2.32
DHFRP00374 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.56□□□□□ -2.32
DHFRP00374 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.56□□□□□ -2.32
DHFRP00374 RN7SKP265-201ENST00000516448 223 ntBASIC0.56□□□□□ -2.32
DHFRP00374 SNORD60.2-201ENST00000516883 86 ntBASIC0.56□□□□□ -2.32
DHFRP00374 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.56□□□□□ -2.32
DHFRP00374 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.56□□□□□ -2.32
DHFRP00374 AC008015.1-201ENST00000555505 465 ntBASIC0.56□□□□□ -2.32
DHFRP00374 SNORA59B-202ENST00000578183 701 ntBASIC0.56□□□□□ -2.32
DHFRP00374 MIR3664-201ENST00000579074 99 ntBASIC0.56□□□□□ -2.32
DHFRP00374 MIR3973-201ENST00000579824 107 ntBASIC0.56□□□□□ -2.32
DHFRP00374 AC018889.1-201ENST00000605372 397 ntBASIC0.56□□□□□ -2.32
DHFRP00374 AC072039.2-201ENST00000608883 439 ntBASIC0.56□□□□□ -2.32
DHFRP00374 AP002782.1-201ENST00000623107 614 ntBASIC0.56□□□□□ -2.32
DHFRP00374 AL356596.1-201ENST00000624230 379 ntBASIC0.56□□□□□ -2.32
DHFRP00374 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.56□□□□□ -2.32
DHFRP00374 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.55□□□□□ -2.32
DHFRP00374 RNU6-78P-201ENST00000362897 107 ntBASIC0.55□□□□□ -2.32
DHFRP00374 RNU6-960P-201ENST00000364056 120 ntBASIC0.55□□□□□ -2.32
DHFRP00374 RNU6-1019P-201ENST00000364424 107 ntBASIC0.55□□□□□ -2.32
DHFRP00374 MIR578-201ENST00000384828 96 ntBASIC0.55□□□□□ -2.32
DHFRP00374 MIR19B1-201ENST00000384829 87 ntBASIC0.55□□□□□ -2.32
DHFRP00374 SNORA12.2-201ENST00000391040 156 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AL136310.1-201ENST00000404926 654 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.55□□□□□ -2.32
DHFRP00374 ATP5J2P3-201ENST00000451550 258 ntBASIC0.55□□□□□ -2.32
DHFRP00374 snoU13.27-201ENST00000459278 104 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AC117454.1-201ENST00000491120 168 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.55□□□□□ -2.32
DHFRP00374 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.55□□□□□ -2.32
DHFRP00374 AC079140.3-201ENST00000511111 550 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AC116353.3-201ENST00000511215 249 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AC023050.2-201ENST00000544968 387 ntBASIC0.55□□□□□ -2.32
DHFRP00374 HSPE1P4-201ENST00000550617 308 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.55□□□□□ -2.32
DHFRP00374 AL034555.1-201ENST00000604816 211 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AL158032.1-201ENST00000605401 106 ntBASIC0.55□□□□□ -2.32
DHFRP00374 RNU6-88P-201ENST00000606801 100 ntBASIC0.55□□□□□ -2.32
DHFRP00374 RNU6-87P-201ENST00000607561 108 ntBASIC0.55□□□□□ -2.32
DHFRP00374 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AC006386.1-201ENST00000619436 415 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AL121895.2-201ENST00000619558 447 ntBASIC0.55□□□□□ -2.32
DHFRP00374 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AC131159.1-201ENST00000621854 213 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AC097372.5-201ENST00000623665 376 ntBASIC0.55□□□□□ -2.32
DHFRP00374 AC068700.1-201ENST00000565862 3754 ntBASIC0.54□□□□□ -2.32
DHFRP00374 RNU6-723P-201ENST00000383973 107 ntBASIC0.54□□□□□ -2.32
DHFRP00374 SNORD116-12-201ENST00000384468 92 ntBASIC0.54□□□□□ -2.32
DHFRP00374 MIR544A-201ENST00000384855 91 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms