Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 MIR597-201ENST00000384968 97 ntBASIC1.46□□□□□ -2.18
SEMA3DO95025 MIR454-201ENST00000390180 115 ntBASIC1.46□□□□□ -2.18
SEMA3DO95025 RNU6-482P-201ENST00000391068 107 ntBASIC1.46□□□□□ -2.18
SEMA3DO95025 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
SEMA3DO95025 RPS15AP10-201ENST00000432472 382 ntBASIC1.46□□□□□ -2.18
SEMA3DO95025 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.46□□□□□ -2.18
SEMA3DO95025 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.46□□□□□ -2.18
SEMA3DO95025 PTP4A1P4-201ENST00000512479 322 ntBASIC1.46□□□□□ -2.18
SEMA3DO95025 AC117532.1-201ENST00000514638 323 ntBASIC1.46□□□□□ -2.18
SEMA3DO95025 SNORD27.1-201ENST00000516319 72 ntBASIC1.46□□□□□ -2.18
SEMA3DO95025 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.46□□□□□ -2.18
SEMA3DO95025 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.46□□□□□ -2.18
SEMA3DO95025 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.46□□□□□ -2.18
SEMA3DO95025 AL590229.1-201ENST00000603497 542 ntBASIC1.46□□□□□ -2.18
SEMA3DO95025 AL136363.2-201ENST00000604173 851 ntBASIC1.46□□□□□ -2.18
SEMA3DO95025 MIR1248-201ENST00000629190 106 ntBASIC1.46□□□□□ -2.18
SEMA3DO95025 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SEMA3DO95025 FGF7P2-201ENST00000332473 296 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 RNU6-1164P-201ENST00000364428 107 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 RNU6-108P-201ENST00000365558 107 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 RNU5A-2P-201ENST00000384337 116 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 MIR29B2-201ENST00000385055 81 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 MIR320A-201ENST00000385302 82 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 RNU11-3P-201ENST00000391111 133 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 BTF3L4P2-201ENST00000392798 346 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 RNU6-248P-201ENST00000410720 107 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.45□□□□□ -2.18
SEMA3DO95025 AL596276.1-201ENST00000434465 418 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 HSPE1P24-201ENST00000450782 238 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 RNU7-182P-201ENST00000459009 62 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.45□□□□□ -2.18
SEMA3DO95025 AC108210.2-201ENST00000503681 201 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 AC010486.2-201ENST00000505572 483 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 MTCO3P28-201ENST00000513351 515 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.45□□□□□ -2.18
SEMA3DO95025 RNU5F-2P-201ENST00000516066 82 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 RNA5SP503-201ENST00000517047 117 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 AP003072.2-201ENST00000527756 676 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 AL356057.1-201ENST00000533798 831 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 AC018630.3-201ENST00000542637 96 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.45□□□□□ -2.18
SEMA3DO95025 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.45□□□□□ -2.18
SEMA3DO95025 SEPT14P19-203ENST00000633205 211 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 AC241585.2-209ENST00000638217 143 ntBASIC1.45□□□□□ -2.18
SEMA3DO95025 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
SEMA3DO95025 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SEMA3DO95025 U3.4-201ENST00000363352 213 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 RNU6-1097P-201ENST00000363586 107 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 SNORD14D-201ENST00000384390 87 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 RNU6-456P-201ENST00000384493 107 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.44□□□□□ -2.18
SEMA3DO95025 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.44□□□□□ -2.18
SEMA3DO95025 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.44□□□□□ -2.18
SEMA3DO95025 SNRPGP7-201ENST00000469016 106 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 MTND3P7-201ENST00000474435 343 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 MTND2P33-201ENST00000506452 1031 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.44□□□□□ -2.18
SEMA3DO95025 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.44□□□□□ -2.18
SEMA3DO95025 Y_RNA.675-201ENST00000516389 149 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 Y_RNA.717-201ENST00000517106 92 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.44□□□□□ -2.18
SEMA3DO95025 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.44□□□□□ -2.18
SEMA3DO95025 SNORD53B-201ENST00000577887 78 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 AC245014.2-201ENST00000603689 287 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 AC246785.4-201ENST00000605374 287 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 AC123912.5-201ENST00000605470 343 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 AC006566.1-201ENST00000608943 513 ntBASIC1.44□□□□□ -2.18
SEMA3DO95025 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.44□□□□□ -2.18
SEMA3DO95025 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.44□□□□□ -2.18
SEMA3DO95025 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.44□□□□□ -2.18
SEMA3DO95025 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SEMA3DO95025 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SEMA3DO95025 RNU6-105P-201ENST00000363909 104 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 Y_RNA.201-201ENST00000364052 96 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 MIR30A-201ENST00000385092 71 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 MIR29C-201ENST00000385231 88 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 AC007098.1-201ENST00000420122 367 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.43□□□□□ -2.18
SEMA3DO95025 AL031667.1-201ENST00000440222 725 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 AC243964.1-201ENST00000441814 261 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.43□□□□□ -2.18
SEMA3DO95025 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.43□□□□□ -2.18
SEMA3DO95025 RPS29P23-201ENST00000458635 123 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 RNA5SP269-201ENST00000459032 137 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 FO393415.2-201ENST00000480085 343 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 AC021146.2-201ENST00000504736 556 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.43□□□□□ -2.18
SEMA3DO95025 AC093259.1-201ENST00000509755 300 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 MTCO3P7-201ENST00000510008 774 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.43□□□□□ -2.18
SEMA3DO95025 RNU6-377P-201ENST00000515965 102 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 MIR449C-201ENST00000516047 92 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 RNU6-991P-201ENST00000516168 107 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.43□□□□□ -2.18
SEMA3DO95025 AP001893.2-201ENST00000526949 202 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SEMA3DO95025 MIR3913-1-201ENST00000577744 102 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 AC016925.2-201ENST00000605108 242 ntBASIC1.43□□□□□ -2.18
SEMA3DO95025 AC008945.2-201ENST00000606056 604 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms