Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 Z84480.1-201ENST00000605131 311 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AL603839.4-201ENST00000624658 1005 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AC068205.3-201ENST00000636385 468 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
UPK1BO75841 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
UPK1BO75841 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
UPK1BO75841 RNU6-1029P-201ENST00000384109 107 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 SNORA12.2-201ENST00000391040 156 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK1BO75841 AC123900.1-201ENST00000420390 96 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 Z99497.1-201ENST00000421282 135 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.21□□□□□ -2.22
UPK1BO75841 AL133217.1-201ENST00000450980 425 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK1BO75841 snoU13.9-201ENST00000458927 103 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK1BO75841 AC132942.1-201ENST00000486753 483 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK1BO75841 AC025465.3-201ENST00000510570 311 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 AC005741.1-201ENST00000511094 432 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 RNU6-759P-201ENST00000516740 103 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK1BO75841 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK1BO75841 AP003034.1-201ENST00000534621 422 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 HSPE1P4-201ENST00000550617 308 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.21□□□□□ -2.22
UPK1BO75841 MIR3136-201ENST00000583498 78 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 MIR98-201ENST00000606724 119 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 AL590808.1-201ENST00000618696 141 ntBASIC1.21□□□□□ -2.22
UPK1BO75841 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.21□□□□□ -2.22
UPK1BO75841 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
UPK1BO75841 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
UPK1BO75841 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
UPK1BO75841 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
UPK1BO75841 RNU6-1141P-201ENST00000364520 107 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 MIR454-201ENST00000390180 115 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 MIR1323-201ENST00000408090 73 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 RN7SKP223-201ENST00000410582 62 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 RNU2-41P-201ENST00000410991 178 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK1BO75841 AL139415.2-201ENST00000431968 163 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 AC009961.2-201ENST00000435771 251 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 AC007677.1-201ENST00000445757 515 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 AC079781.2-201ENST00000446424 169 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK1BO75841 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK1BO75841 RNU1-131P-201ENST00000458943 161 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 AC087477.1-201ENST00000465747 340 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 RPL31P58-201ENST00000469001 379 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 MTCO3P28-201ENST00000513351 515 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK1BO75841 RN7SKP265-201ENST00000516448 223 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 RNU6-250P-201ENST00000516958 103 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 RNA5SP503-201ENST00000517047 117 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.2□□□□□ -2.22
UPK1BO75841 AC106038.2-201ENST00000520706 568 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 AC009094.1-201ENST00000564443 426 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 MIR4255-201ENST00000579351 72 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 MIR4672-201ENST00000583126 81 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 BNIP3P16-201ENST00000589779 534 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 VN1R80P-201ENST00000597126 338 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 Z99289.3-201ENST00000605586 594 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 MIR502-201ENST00000606349 86 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 AL050343.2-201ENST00000607338 280 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 SCARNA15.3-201ENST00000626315 122 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 SCARNA4.1-201ENST00000628597 123 ntBASIC1.2□□□□□ -2.22
UPK1BO75841 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
UPK1BO75841 AC233981.2-201ENST00000611524 1614 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
UPK1BO75841 Y_RNA.67-201ENST00000362870 100 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 RNU6-271P-201ENST00000363858 105 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 SNORD32A-201ENST00000364805 84 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 RNU6-438P-201ENST00000365561 103 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 RNU6-296P-201ENST00000384608 107 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 SNORA40.3-201ENST00000390964 122 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 AL031577.2-201ENST00000404133 280 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 MTCYBP2-201ENST00000407745 171 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 RNA5SP508-201ENST00000411327 119 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 HIGD1AP15-201ENST00000416198 280 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 AL358453.1-201ENST00000422522 250 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 AL596276.1-201ENST00000434465 418 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 AL031274.1-201ENST00000450334 232 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
UPK1BO75841 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.19□□□□□ -2.22
UPK1BO75841 RNU7-182P-201ENST00000459009 62 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 MTCO2P6-201ENST00000463134 685 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 AC010486.1-201ENST00000511793 424 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 AC119751.5-201ENST00000514077 770 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 RNU6-232P-201ENST00000517144 64 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 AC109479.2-201ENST00000517842 174 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.19□□□□□ -2.22
UPK1BO75841 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.19□□□□□ -2.22
UPK1BO75841 MIR3682-201ENST00000581338 84 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.19□□□□□ -2.22
UPK1BO75841 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
UPK1BO75841 AF246928.1-201ENST00000623768 87 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 AC064859.1-201ENST00000624741 174 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms