Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC096638.1-201ENST00000444678 216 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.16□□□□□ -1.74
PRPF40AO75400 RPL39P38-201ENST00000467018 153 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 GZMAP1-201ENST00000503054 631 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 RNU6-58P-201ENST00000517143 103 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 AC026333.2-201ENST00000542164 106 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRPF40AO75400 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.16□□□□□ -1.74
PRPF40AO75400 AC023824.2-201ENST00000566185 400 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
PRPF40AO75400 RPS15AP11-201ENST00000594193 385 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.16□□□□□ -1.74
PRPF40AO75400 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRPF40AO75400 PWAR6-201ENST00000552334 4618 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.16□□□□□ -1.74
PRPF40AO75400 LINC02555-201ENST00000563933 1951 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.16□□□□□ -1.74
PRPF40AO75400 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PRPF40AO75400 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PRPF40AO75400 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PRPF40AO75400 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PRPF40AO75400 MTND5P6-201ENST00000422338 1798 ntBASIC4.15□□□□□ -1.74
PRPF40AO75400 Y_RNA.14-201ENST00000362415 103 ntBASIC4.15□□□□□ -1.75
PRPF40AO75400 AL358075.3-201ENST00000426289 226 ntBASIC4.15□□□□□ -1.75
PRPF40AO75400 AL445584.1-201ENST00000431451 330 ntBASIC4.15□□□□□ -1.75
PRPF40AO75400 AC090525.1-201ENST00000479116 478 ntBASIC4.15□□□□□ -1.75
PRPF40AO75400 AC098869.1-201ENST00000481627 292 ntBASIC4.15□□□□□ -1.75
PRPF40AO75400 RPL21P129-201ENST00000491732 478 ntBASIC4.15□□□□□ -1.75
PRPF40AO75400 SNORA31.16-201ENST00000516773 139 ntBASIC4.15□□□□□ -1.75
PRPF40AO75400 MIR2276-201ENST00000516886 89 ntBASIC4.15□□□□□ -1.75
PRPF40AO75400 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.15□□□□□ -1.75
PRPF40AO75400 UBL5P4-201ENST00000562584 236 ntBASIC4.15□□□□□ -1.75
PRPF40AO75400 MIR4300-201ENST00000581016 96 ntBASIC4.15□□□□□ -1.75
PRPF40AO75400 MIR3136-201ENST00000583498 78 ntBASIC4.15□□□□□ -1.75
PRPF40AO75400 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.15□□□□□ -1.75
PRPF40AO75400 SNORD98-201ENST00000636377 67 ntBASIC4.15□□□□□ -1.75
PRPF40AO75400 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.15□□□□□ -1.75
PRPF40AO75400 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.15□□□□□ -1.75
PRPF40AO75400 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PRPF40AO75400 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRPF40AO75400 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PRPF40AO75400 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PRPF40AO75400 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.14□□□□□ -1.75
PRPF40AO75400 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.14□□□□□ -1.75
PRPF40AO75400 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
PRPF40AO75400 AC058791.1-201ENST00000608412 3198 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 RNU6-318P-201ENST00000384283 103 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 MIR487A-201ENST00000385009 80 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 MIR10B-201ENST00000385011 110 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 RNU6-159P-201ENST00000391080 106 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 RN7SKP156-201ENST00000410308 342 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 RNU2-25P-201ENST00000411041 191 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 AL445305.1-201ENST00000432577 575 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 HMGN2P20-201ENST00000437531 273 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.14□□□□□ -1.75
PRPF40AO75400 RN7SL442P-201ENST00000473804 320 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.14□□□□□ -1.75
PRPF40AO75400 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.14□□□□□ -1.75
PRPF40AO75400 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 AC006133.1-201ENST00000617106 264 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.14□□□□□ -1.75
PRPF40AO75400 AP000553.6-201ENST00000641242 118 ntBASIC4.14□□□□□ -1.75
PRPF40AO75400 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PRPF40AO75400 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRPF40AO75400 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.14□□□□□ -1.75
PRPF40AO75400 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF40AO75400 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF40AO75400 MFSD8-236ENST00000641509 4050 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PRPF40AO75400 RNA5SP361-201ENST00000362686 118 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 Y_RNA.84-201ENST00000363011 104 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 SNORD114-19-201ENST00000363072 75 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 RNU6-280P-201ENST00000364145 104 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 Y_RNA.552-201ENST00000384665 112 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 MIR23B-201ENST00000384832 97 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 MIR767-201ENST00000390228 109 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 SNORD115-46-201ENST00000390982 71 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 U3.39-201ENST00000408569 239 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 SNORD12B-201ENST00000410433 91 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.13□□□□□ -1.75
PRPF40AO75400 RPS4XP2-201ENST00000458402 793 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 U3.44-201ENST00000458938 192 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 AIG1P1-201ENST00000503376 148 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 RNU2-27P-201ENST00000516185 142 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 SNORA67.7-201ENST00000516664 135 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 RNA5SP54-201ENST00000516951 92 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.13□□□□□ -1.75
PRPF40AO75400 AC136932.1-201ENST00000574771 208 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 MIR3158-1-201ENST00000583596 81 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 SDR42E1P4-201ENST00000620894 481 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 U6.98-201ENST00000637157 84 ntBASIC4.13□□□□□ -1.75
PRPF40AO75400 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.13□□□□□ -1.75
PRPF40AO75400 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.13□□□□□ -1.75
PRPF40AO75400 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF40AO75400 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF40AO75400 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF40AO75400 RNU5F-3P-201ENST00000363767 117 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 SNORD115-8-201ENST00000363856 82 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 SNORD115-38-201ENST00000365037 82 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms