Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MIR200A-201ENST00000384875 90 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 RNA5SP219-201ENST00000390940 113 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 AC127391.1-201ENST00000411737 98 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 AL353621.1-201ENST00000418219 243 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 NCOR1P3-201ENST00000420479 303 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 RPS27P16-201ENST00000425758 201 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.09□□□□□ -2.4
CACNA1AO00555 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.09□□□□□ -2.4
CACNA1AO00555 MTCO2P25-201ENST00000447065 681 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 AC132479.1-201ENST00000449160 144 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 RNU7-90P-201ENST00000459216 62 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
CACNA1AO00555 AC091874.1-201ENST00000511402 339 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 AC022483.1-201ENST00000514020 567 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 RN7SKP88-201ENST00000516847 250 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 RNU6-1092P-201ENST00000516955 87 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.09□□□□□ -2.4
CACNA1AO00555 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.09□□□□□ -2.4
CACNA1AO00555 AP003034.1-201ENST00000534621 422 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.09□□□□□ -2.4
CACNA1AO00555 HMGB1P33-201ENST00000563485 527 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.09□□□□□ -2.4
CACNA1AO00555 AF129408.1-201ENST00000608767 431 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 7SK.8-201ENST00000612110 250 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 7SK.11-201ENST00000615477 250 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.09□□□□□ -2.4
CACNA1AO00555 7SK.13-201ENST00000622040 250 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 MIR1246-201ENST00000636535 73 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 RNU6-439P-201ENST00000384188 106 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 Y_RNA.543-201ENST00000384649 107 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 MIR19B1-201ENST00000384829 87 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 RNU6-1054P-201ENST00000411293 104 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CACNA1AO00555 ELOCP14-201ENST00000428070 331 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 CETN4P-201ENST00000432407 469 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.08□□□□□ -2.4
CACNA1AO00555 ELOCP7-201ENST00000439968 331 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 OR6C5P-201ENST00000452388 923 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 RPL18AP17-201ENST00000455326 198 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC010409.1-201ENST00000487382 476 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 PTP4A1P4-201ENST00000512479 322 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.08□□□□□ -2.4
CACNA1AO00555 RNU6-586P-201ENST00000517265 104 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.08□□□□□ -2.4
CACNA1AO00555 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.08□□□□□ -2.4
CACNA1AO00555 NACAP3-201ENST00000552100 481 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AL671309.1-201ENST00000603750 544 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC105148.1-201ENST00000604961 409 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC112220.3-201ENST00000605502 502 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AL365434.2-201ENST00000607979 234 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC096586.1-201ENST00000610267 561 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC092106.3-201ENST00000611308 722 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC093913.1-201ENST00000614178 329 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CACNA1AO00555 RNU6-23P-201ENST00000363283 107 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 RNU4-48P-201ENST00000365559 182 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AL591034.2-201ENST00000402839 359 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.08□□□□□ -2.4
CACNA1AO00555 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.08□□□□□ -2.4
CACNA1AO00555 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.08□□□□□ -2.4
CACNA1AO00555 AC007919.1-201ENST00000429380 217 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 MTCYBP1-201ENST00000454315 1119 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC011005.2-201ENST00000487324 359 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC002350.1-201ENST00000490759 375 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.08□□□□□ -2.4
CACNA1AO00555 AC025465.3-201ENST00000510570 311 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 RNA5SP437-201ENST00000517249 129 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC109329.1-201ENST00000518744 317 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CACNA1AO00555 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.08□□□□□ -2.4
CACNA1AO00555 MRPS36P5-201ENST00000551909 298 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AC008088.1-201ENST00000580993 280 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 AP001429.1-201ENST00000602568 530 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.08□□□□□ -2.4
CACNA1AO00555 RMST_4.1-201ENST00000616886 107 ntBASIC0.08□□□□□ -2.4
CACNA1AO00555 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.08□□□□□ -2.4
CACNA1AO00555 MTND4P21-201ENST00000453886 1357 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC092447.10-201ENST00000620607 1652 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC090625.1-201ENST00000357130 210 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 RNU6-349P-201ENST00000362402 107 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 Y_RNA.245-201ENST00000364493 95 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 RNU6-514P-201ENST00000384208 107 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 MIR605-201ENST00000385078 83 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 Y_RNA.582-201ENST00000391023 95 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 TMSB4XP8-201ENST00000402089 135 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 USP9YP19-201ENST00000412165 485 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 TMSB4XP6-201ENST00000415187 135 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 USP9YP13-201ENST00000417797 480 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC139712.2-201ENST00000424302 339 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 TMSB4XP1-201ENST00000424567 135 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC092170.1-201ENST00000440211 356 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AL441985.1-201ENST00000457727 251 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.07□□□□□ -2.4
CACNA1AO00555 AC022493.2-201ENST00000506122 481 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 RNA5SP135-201ENST00000517019 125 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.07□□□□□ -2.4
CACNA1AO00555 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.07□□□□□ -2.4
CACNA1AO00555 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms