Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC009161.1-201ENST00000417306 376 ntBASIC2.38□□□□□ -2.03
O00370 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.38□□□□□ -2.03
O00370 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.38□□□□□ -2.03
O00370 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.38□□□□□ -2.03
O00370 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.38□□□□□ -2.03
O00370 RNU7-138P-201ENST00000459479 64 ntBASIC2.38□□□□□ -2.03
O00370 AC007547.1-201ENST00000462177 490 ntBASIC2.38□□□□□ -2.03
O00370 RPL30P12-201ENST00000474666 353 ntBASIC2.38□□□□□ -2.03
O00370 AC104435.1-201ENST00000483483 166 ntBASIC2.38□□□□□ -2.03
O00370 CKS1BP2-201ENST00000497342 240 ntBASIC2.38□□□□□ -2.03
O00370 AC079140.5-201ENST00000507882 310 ntBASIC2.38□□□□□ -2.03
O00370 RPL39P5-202ENST00000512505 151 ntBASIC2.38□□□□□ -2.03
O00370 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
O00370 AP000889.2-201ENST00000532684 490 ntBASIC2.38□□□□□ -2.03
O00370 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.38□□□□□ -2.03
O00370 AC009127.3-201ENST00000570531 403 ntBASIC2.38□□□□□ -2.03
O00370 MIR5694-201ENST00000581190 76 ntBASIC2.38□□□□□ -2.03
O00370 MIR5692C1-201ENST00000585309 91 ntBASIC2.38□□□□□ -2.03
O00370 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
O00370 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
O00370 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.38□□□□□ -2.03
O00370 AC012640.5-201ENST00000623897 319 ntBASIC2.38□□□□□ -2.03
O00370 Z75746.1-201ENST00000440243 2080 ntBASIC2.38□□□□□ -2.03
O00370 Y_RNA.86-201ENST00000363020 111 ntBASIC2.37□□□□□ -2.03
O00370 U3.13-201ENST00000364804 214 ntBASIC2.37□□□□□ -2.03
O00370 MIR221-201ENST00000385135 110 ntBASIC2.37□□□□□ -2.03
O00370 RNU6-1245P-201ENST00000411130 106 ntBASIC2.37□□□□□ -2.03
O00370 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.37□□□□□ -2.03
O00370 AC140059.1-201ENST00000489238 361 ntBASIC2.37□□□□□ -2.03
O00370 AC025465.4-201ENST00000513422 638 ntBASIC2.37□□□□□ -2.03
O00370 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.37□□□□□ -2.03
O00370 CBX3P7-201ENST00000532876 502 ntBASIC2.37□□□□□ -2.03
O00370 AL590808.1-201ENST00000618696 141 ntBASIC2.37□□□□□ -2.03
O00370 RMST_7.1-201ENST00000621935 268 ntBASIC2.37□□□□□ -2.03
O00370 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
O00370 ZNF658B-202ENST00000615961 3375 ntBASIC2.36□□□□□ -2.03
O00370 RNU6-1106P-201ENST00000390845 107 ntBASIC2.36□□□□□ -2.03
O00370 MIR450B-201ENST00000401182 78 ntBASIC2.36□□□□□ -2.03
O00370 RNU6-293P-201ENST00000411259 106 ntBASIC2.36□□□□□ -2.03
O00370 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
O00370 AC003685.2-201ENST00000422795 395 ntBASIC2.36□□□□□ -2.03
O00370 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.36□□□□□ -2.03
O00370 RPL7P12-201ENST00000446719 750 ntBASIC2.36□□□□□ -2.03
O00370 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.36□□□□□ -2.03
O00370 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.36□□□□□ -2.03
O00370 AC068781.1-201ENST00000488231 618 ntBASIC2.36□□□□□ -2.03
O00370 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.36□□□□□ -2.03
O00370 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.36□□□□□ -2.03
O00370 AC087854.1-201ENST00000519706 414 ntBASIC2.36□□□□□ -2.03
O00370 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.36□□□□□ -2.03
O00370 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.36□□□□□ -2.03
O00370 SNORD53-201ENST00000579969 78 ntBASIC2.36□□□□□ -2.03
O00370 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
O00370 AL161423.1-201ENST00000613700 262 ntBASIC2.36□□□□□ -2.03
O00370 MIR6715A-201ENST00000615929 79 ntBASIC2.36□□□□□ -2.03
O00370 AC002553.4-201ENST00000616896 331 ntBASIC2.36□□□□□ -2.03
O00370 AC009831.4-201ENST00000620744 325 ntBASIC2.36□□□□□ -2.03
O00370 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
O00370 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
O00370 RNU6-336P-201ENST00000364891 107 ntBASIC2.35□□□□□ -2.03
O00370 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
O00370 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
O00370 RNU2-63P-201ENST00000410792 194 ntBASIC2.35□□□□□ -2.03
O00370 AC074117.2-201ENST00000417130 397 ntBASIC2.35□□□□□ -2.03
O00370 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.35□□□□□ -2.03
O00370 SRIP2-201ENST00000428470 166 ntBASIC2.35□□□□□ -2.03
O00370 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
O00370 AC124916.1-201ENST00000444020 547 ntBASIC2.35□□□□□ -2.03
O00370 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.35□□□□□ -2.03
O00370 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.35□□□□□ -2.03
O00370 AC008549.1-201ENST00000512900 643 ntBASIC2.35□□□□□ -2.03
O00370 RNU6-1069P-201ENST00000516612 133 ntBASIC2.35□□□□□ -2.03
O00370 SNORA31.23-201ENST00000517219 133 ntBASIC2.35□□□□□ -2.03
O00370 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.35□□□□□ -2.03
O00370 AP005597.4-201ENST00000526762 229 ntBASIC2.35□□□□□ -2.03
O00370 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.35□□□□□ -2.03
O00370 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.35□□□□□ -2.03
O00370 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.35□□□□□ -2.03
O00370 AC096772.1-201ENST00000609146 564 ntBASIC2.35□□□□□ -2.03
O00370 AC068944.2-201ENST00000610373 403 ntBASIC2.35□□□□□ -2.03
O00370 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
O00370 AC009033.1-201ENST00000624279 431 ntBASIC2.35□□□□□ -2.03
O00370 U4.7-201ENST00000638126 106 ntBASIC2.35□□□□□ -2.03
O00370 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
O00370 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
O00370 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
O00370 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.03
O00370 SNORD114-19-201ENST00000363072 75 ntBASIC2.34□□□□□ -2.03
O00370 Y_RNA.167-201ENST00000363735 109 ntBASIC2.34□□□□□ -2.03
O00370 RNU6-105P-201ENST00000363909 104 ntBASIC2.34□□□□□ -2.03
O00370 RNU6-843P-201ENST00000384454 104 ntBASIC2.34□□□□□ -2.03
O00370 MIR544A-201ENST00000384855 91 ntBASIC2.34□□□□□ -2.03
O00370 RNU6-876P-201ENST00000391295 104 ntBASIC2.34□□□□□ -2.03
O00370 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
O00370 SNORA3.2-201ENST00000408221 125 ntBASIC2.34□□□□□ -2.03
O00370 RNA5SP270-201ENST00000411361 118 ntBASIC2.34□□□□□ -2.03
O00370 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.34□□□□□ -2.03
O00370 AC097463.2-201ENST00000421074 142 ntBASIC2.34□□□□□ -2.03
O00370 MTND1P2-201ENST00000430604 821 ntBASIC2.34□□□□□ -2.03
O00370 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms