Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC006023.1-201ENST00000603944 259 ntBASIC3.73□□□□□ -1.81
RFXAPO00287 AC037487.3-201ENST00000606668 112 ntBASIC3.73□□□□□ -1.81
RFXAPO00287 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.73□□□□□ -1.81
RFXAPO00287 AL137790.1-201ENST00000634283 177 ntBASIC3.73□□□□□ -1.81
RFXAPO00287 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RFXAPO00287 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RFXAPO00287 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFXAPO00287 OTUD4P1-201ENST00000237841 3067 ntBASIC3.73□□□□□ -1.81
RFXAPO00287 AC233981.2-201ENST00000611524 1614 ntBASIC3.73□□□□□ -1.81
RFXAPO00287 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
RFXAPO00287 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFXAPO00287 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFXAPO00287 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFXAPO00287 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.72□□□□□ -1.81
RFXAPO00287 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RFXAPO00287 MIR449A-201ENST00000362113 91 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 RNU6-215P-201ENST00000365169 102 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 RNU6-1074P-201ENST00000383995 104 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 RNU6-514P-201ENST00000384208 107 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 Y_RNA.570-201ENST00000384750 101 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 AL138785.1-201ENST00000425821 331 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 AC024067.1-201ENST00000426199 223 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 AL627311.1-201ENST00000431514 115 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 AL512844.2-201ENST00000433990 593 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 RPL27AP5-201ENST00000469428 449 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 TRBV12-2-201ENST00000489763 344 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 AC097462.2-201ENST00000504623 481 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 AC010265.1-201ENST00000513509 211 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.72□□□□□ -1.81
RFXAPO00287 FAM60BP-201ENST00000578364 658 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.72□□□□□ -1.81
RFXAPO00287 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RFXAPO00287 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RFXAPO00287 FAM35DP-201ENST00000323387 2712 ntBASIC3.72□□□□□ -1.81
RFXAPO00287 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFXAPO00287 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RFXAPO00287 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
RFXAPO00287 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFXAPO00287 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.71□□□□□ -1.82
RFXAPO00287 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
RFXAPO00287 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RFXAPO00287 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.71□□□□□ -1.82
RFXAPO00287 MIR410-201ENST00000362222 80 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 MIR422A-201ENST00000362286 90 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 RNU6-78P-201ENST00000362897 107 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 RNU4-9P-201ENST00000364951 139 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 SNORA70E-201ENST00000384492 135 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 Y_RNA.580-201ENST00000391004 95 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 AL138878.1-201ENST00000405131 347 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 MIR1250-201ENST00000408098 113 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 RNU6-257P-201ENST00000410238 98 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 RNU6-1001P-201ENST00000411265 100 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 Z85995.1-201ENST00000415547 335 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 NDUFB1P1-201ENST00000435191 180 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 Z82210.1-201ENST00000440037 231 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.71□□□□□ -1.82
RFXAPO00287 AC006445.1-201ENST00000491925 405 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 HMGB3P3-201ENST00000510526 400 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 RNU6-377P-201ENST00000515965 102 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 SNORD116-25-201ENST00000516517 92 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 SNORA27.4-201ENST00000516650 95 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 AL121603.1-201ENST00000553815 142 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 UBL5P4-201ENST00000562584 236 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 AC055872.1-201ENST00000570978 278 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 AL162713.1-201ENST00000604480 262 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 MIR7106-201ENST00000612419 65 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 MIR6715A-201ENST00000615929 79 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFXAPO00287 AC073349.3-201ENST00000617616 186 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 SCARNA4-201ENST00000629045 128 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RFXAPO00287 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.71□□□□□ -1.82
RFXAPO00287 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFXAPO00287 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.71□□□□□ -1.82
RFXAPO00287 AL391516.1-201ENST00000554380 2449 ntBASIC3.71□□□□□ -1.82
RFXAPO00287 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFXAPO00287 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.71□□□□□ -1.82
RFXAPO00287 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFXAPO00287 AC009541.1-201ENST00000438279 2662 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RFXAPO00287 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RFXAPO00287 RNU6-653P-201ENST00000363074 106 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 RNU6-20P-201ENST00000384106 107 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 Y_RNA.488-201ENST00000384403 102 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 SNORA44-201ENST00000384584 132 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 SNORA40C-201ENST00000391285 128 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 Y_RNA.597-201ENST00000410463 100 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 Y_RNA.629-201ENST00000411368 105 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.7□□□□□ -1.82
RFXAPO00287 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.7□□□□□ -1.82
RFXAPO00287 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.7□□□□□ -1.82
RFXAPO00287 AC007560.1-201ENST00000426912 237 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 AC007395.1-201ENST00000451333 677 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 AC114982.1-201ENST00000469402 321 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 KC877373.1-201ENST00000479066 408 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 AL160314.1-201ENST00000490836 438 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms