Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC188H7C350 ZNF658B-202ENST00000615961 3375 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 RNU6-743P-201ENST00000364151 106 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 RNU4-20P-201ENST00000365601 151 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 RNU6-38P-201ENST00000384085 107 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 RNU6-43P-201ENST00000384302 107 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 RNU6-1068P-201ENST00000410958 103 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.26□□□□□ -2.05
CCDC188H7C350 EDDM3CP-201ENST00000415977 425 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AL590135.1-201ENST00000422215 156 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AC019205.3-201ENST00000424573 156 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AL121890.1-201ENST00000435457 205 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AC016700.2-201ENST00000446011 156 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 RPL23AP7-203ENST00000449021 469 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AC108938.1-201ENST00000451204 136 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AC013470.1-201ENST00000453438 462 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 RNU6-333P-201ENST00000459117 107 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.26□□□□□ -2.05
CCDC188H7C350 AC015911.1-201ENST00000495111 156 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 RN7SL636P-201ENST00000497504 294 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC188H7C350 AC091885.1-201ENST00000506658 268 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AC104576.1-201ENST00000524225 88 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 COPS8P3-201ENST00000526024 482 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC188H7C350 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.26□□□□□ -2.05
CCDC188H7C350 AC009314.1-201ENST00000603871 304 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AL034555.1-201ENST00000604816 211 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AC087241.4-201ENST00000612441 480 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AL159153.1-201ENST00000619688 317 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC188H7C350 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 MIR203B-201ENST00000636080 86 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC188H7C350 OR4G1P-203ENST00000641984 1631 ntBASIC2.26□□□□□ -2.05
CCDC188H7C350 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
CCDC188H7C350 AC080100.1-201ENST00000624239 5356 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 SNORD115-3-201ENST00000363100 82 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 RNU6-1141P-201ENST00000364520 107 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 RNU6-483P-201ENST00000384088 108 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 MIR221-201ENST00000385135 110 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 Y_RNA.597-201ENST00000410463 100 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC188H7C350 AL589823.1-201ENST00000429577 183 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC188H7C350 AC244670.1-201ENST00000436879 112 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC188H7C350 AC019235.1-201ENST00000503847 207 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.25□□□□□ -2.05
CCDC188H7C350 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC188H7C350 RNU7-193P-201ENST00000516723 65 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 SNORD60.2-201ENST00000516883 86 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 RNU6-835P-201ENST00000516974 104 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 AP002770.2-201ENST00000543613 532 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 AL118558.2-201ENST00000556294 238 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 RPS3AP23-202ENST00000574601 686 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC188H7C350 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC188H7C350 AC103705.1-201ENST00000619013 241 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 CTSLP2-204ENST00000629029 392 ntBASIC2.25□□□□□ -2.05
CCDC188H7C350 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC188H7C350 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC188H7C350 RNU6-944P-201ENST00000364023 107 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 Y_RNA.231-201ENST00000364358 102 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 RNA5SP138-201ENST00000365098 114 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 Y_RNA.504-201ENST00000384481 104 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CCDC188H7C350 RNU6-648P-201ENST00000410190 107 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 RNA5SP338-201ENST00000410495 85 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 RNA5SP508-201ENST00000411327 119 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 MRPS10P2-201ENST00000431226 381 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.24□□□□□ -2.05
CCDC188H7C350 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.24□□□□□ -2.05
CCDC188H7C350 RNU6-1208P-201ENST00000459588 107 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 AC079804.2-201ENST00000490376 200 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC188H7C350 RNU5F-2P-201ENST00000516066 82 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.24□□□□□ -2.05
CCDC188H7C350 AC034114.1-201ENST00000520293 285 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC188H7C350 AC009127.3-201ENST00000570531 403 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 MIR3136-201ENST00000583498 78 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 VN1R107P-201ENST00000601784 209 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 AC092954.2-201ENST00000609103 430 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 DISC2.1-201ENST00000612827 205 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
CCDC188H7C350 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.24□□□□□ -2.05
CCDC188H7C350 Y_RNA.41-201ENST00000362646 102 ntBASIC2.23□□□□□ -2.05
CCDC188H7C350 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CCDC188H7C350 BTF3L4P2-201ENST00000392798 346 ntBASIC2.23□□□□□ -2.05
CCDC188H7C350 RPS29P13-201ENST00000402041 169 ntBASIC2.23□□□□□ -2.05
CCDC188H7C350 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC188H7C350 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC188H7C350 AC008628.2-201ENST00000502605 298 ntBASIC2.23□□□□□ -2.05
CCDC188H7C350 RNU6-237P-201ENST00000515985 71 ntBASIC2.23□□□□□ -2.05
CCDC188H7C350 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC188H7C350 SNORD53-201ENST00000579969 78 ntBASIC2.23□□□□□ -2.05
CCDC188H7C350 AC007229.1-201ENST00000590455 412 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms