Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 RNU6-266P-201ENST00000364225 107 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 RNU4-66P-201ENST00000365199 138 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 Y_RNA.378-201ENST00000365652 113 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 RNU6-1032P-201ENST00000384100 107 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 RNA5SP219-201ENST00000390940 113 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AL590002.1-201ENST00000406554 418 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AC138623.1-201ENST00000418060 216 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AC097463.2-201ENST00000421074 142 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 MTCO3P38-201ENST00000468910 766 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 LRRC34P2-201ENST00000514850 553 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 SCARNA3-201ENST00000517097 143 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 SNORA25.17-201ENST00000517184 124 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 SNORA31.23-201ENST00000517219 133 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AC010186.2-204ENST00000537668 439 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 MIR4424-201ENST00000585257 86 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 uc_338.14-201ENST00000613162 166 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 uc_338.11-201ENST00000619132 160 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 YWHAEP7-203ENST00000622054 312 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 AC091932.3-201ENST00000624223 323 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 RNU1-72P-201ENST00000362976 153 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 RNU6-1322P-201ENST00000364309 107 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 RNA5SP125-201ENST00000364843 120 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 RNU5E-7P-201ENST00000365290 117 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 RNU6-38P-201ENST00000384085 107 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 RPL23AP36-201ENST00000413895 458 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AC074117.2-201ENST00000417130 397 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 RPS3AP44-201ENST00000425466 790 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AC108667.1-201ENST00000428618 249 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AC003989.2-201ENST00000440224 169 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AC012308.1-201ENST00000451232 178 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 MTND3P16-201ENST00000452205 344 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AL441985.1-201ENST00000457727 251 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 RNU6-333P-201ENST00000459117 107 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 RNA5SP233-201ENST00000459153 113 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AC117503.1-201ENST00000472241 394 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 RPL30P12-201ENST00000474666 353 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AC108729.3-201ENST00000513484 108 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 RNU6-1281P-201ENST00000516223 105 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 RNU5B-3P-201ENST00000516601 115 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 CBX3P7-201ENST00000532876 502 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 CR383656.8-201ENST00000549046 145 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AC021646.1-201ENST00000605469 484 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 SDR42E1P4-201ENST00000620894 481 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 Z69720.2-201ENST00000624755 279 ntBASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NKX2-6A6NCS4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 RNU6-527P-201ENST00000363425 104 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 RNU6-1215P-201ENST00000384441 102 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 RNU6-843P-201ENST00000384454 104 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 SNORD73A-201ENST00000386062 65 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 RNU6-648P-201ENST00000410190 107 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 USP9YP8-201ENST00000441913 500 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 AL031274.1-201ENST00000450334 232 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 RNU7-167P-201ENST00000459160 62 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 AC104564.1-201ENST00000493028 407 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 RNA5SP364-201ENST00000516938 78 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 ANP32BP3-201ENST00000559213 706 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 HMGB1P33-201ENST00000563485 527 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 AC009314.1-201ENST00000603871 304 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 AL449363.1-201ENST00000617815 186 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 AC073534.2-201ENST00000620377 381 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 SCARNA4-202ENST00000625402 129 ntBASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NKX2-6A6NCS4 AC010329.5-201ENST00000623497 2174 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 Y_RNA.40-201ENST00000362645 93 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 RAP1BP3-201ENST00000407180 549 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms