Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 AC005534.2-201ENST00000431047 433 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 AP001324.2-201ENST00000461163 319 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 RPS26P21-201ENST00000475397 348 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 RPL31P41-201ENST00000477967 372 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 FO393415.2-201ENST00000480085 343 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 RN7SL499P-201ENST00000481141 276 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 AC022447.4-201ENST00000504053 364 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-470P-201ENST00000515954 104 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-1153P-201ENST00000516760 105 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 SCARNA11.3-201ENST00000517276 130 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 AP000889.1-201ENST00000530968 660 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 AC016256.1-201ENST00000547971 354 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 AC011471.1-201ENST00000585766 187 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 AL158827.2-201ENST00000602494 330 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 MIR1302-2-201ENST00000607096 138 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 AL162274.2-201ENST00000614406 332 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 AC134503.1-201ENST00000633048 54 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 AL691447.3-201ENST00000635020 330 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 ZNF299P-201ENST00000406845 1804 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 AC009541.1-201ENST00000438279 2662 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 AP000560.1-201ENST00000624150 1937 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-1115P-201ENST00000362490 106 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 Y_RNA.123-201ENST00000363338 102 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 Y_RNA.128-201ENST00000363391 112 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 Y_RNA.138-201ENST00000363462 102 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-595P-201ENST00000363944 107 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 RNU1-140P-201ENST00000365040 165 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 SNORA44-201ENST00000384584 132 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 MIR559-201ENST00000385188 96 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 AC078809.1-201ENST00000427601 140 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 AL135938.1-201ENST00000443141 297 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 RPL39P29-201ENST00000447779 157 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 snoU13.14-201ENST00000459372 104 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-976P-201ENST00000516086 111 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 SNORA31.6-201ENST00000516241 130 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 IGHV3-76-201ENST00000522465 295 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 CBX3P8-201ENST00000532412 525 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 AC079598.5-201ENST00000547460 117 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 SUB1P3-201ENST00000564581 315 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 AC060766.3-201ENST00000591442 263 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 AC008739.2-201ENST00000597006 317 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 MIR92B-201ENST00000607575 96 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 AC005014.2-201ENST00000607795 599 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 AC007792.1-201ENST00000623023 402 ntBASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TCRBV7S3A2A0A539 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-490P-201ENST00000362985 107 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 SNORD114-19-201ENST00000363072 75 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 Y_RNA.112-201ENST00000363250 102 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 SNORA26.3-201ENST00000391119 136 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 AL356057.3-201ENST00000402607 340 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 AL138827.1-201ENST00000402666 306 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 AL137792.2-201ENST00000443484 235 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 AL513124.1-201ENST00000450410 614 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 AC091874.1-201ENST00000511402 339 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 MRPS36P2-201ENST00000512569 299 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 AC022080.3-201ENST00000544433 482 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 AC105137.2-201ENST00000569073 466 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 MIR5701-3-201ENST00000578890 82 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 MIR4325-201ENST00000583049 90 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 MIR5701-1-201ENST00000585138 82 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 MIR5701-2-201ENST00000615634 82 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 SNORA43.4-201ENST00000629559 138 ntBASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
TCRBV7S3A2A0A539 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 MIR369-201ENST00000362155 70 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 MIR208A-201ENST00000362287 71 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-1083P-201ENST00000384022 107 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-474P-201ENST00000384243 107 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 Y_RNA.463-201ENST00000384271 102 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 Y_RNA.533-201ENST00000384596 114 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 RNA5SP210-201ENST00000391034 120 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms