Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.13□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC010900.2-201ENST00000604508 210 ntBASIC1.13□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.13□□□□□ -2.23
IGHV3-43A0A0B4J1X8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC008250.2-201ENST00000615261 205 ntBASIC1.13□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC011155.2-201ENST00000623202 216 ntBASIC1.13□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC008993.2-201ENST00000631744 806 ntBASIC1.13□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.13□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SNORD98-201ENST00000636377 67 ntBASIC1.13□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC245060.5-201ENST00000610778 3293 ntBASIC1.13□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SNORD114-6-201ENST00000364393 72 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-1303P-201ENST00000364841 107 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-338P-201ENST00000383888 105 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-203P-201ENST00000384038 104 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-997P-201ENST00000384725 107 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-293P-201ENST00000411259 106 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC010099.3-201ENST00000423896 409 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 GPR143P-201ENST00000434155 205 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC079781.2-201ENST00000446424 169 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL162395.1-201ENST00000457882 422 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-333P-201ENST00000459117 107 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC022447.4-201ENST00000504053 364 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RN7SKP265-201ENST00000516448 223 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 MIR3682-201ENST00000581338 84 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC110760.3-201ENST00000598794 467 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.12□□□□□ -2.23
IGHV3-43A0A0B4J1X8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 LINC02555-201ENST00000563933 1951 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-661P-201ENST00000362409 107 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SNORA67.5-201ENST00000391036 107 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SNORA17.3-201ENST00000391159 129 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC013410.2-201ENST00000422627 201 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 ISCA1P6-201ENST00000427740 390 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 HMGN2P18-201ENST00000450680 270 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU7-125P-201ENST00000458760 62 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC130509.1-201ENST00000464158 433 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC132942.1-201ENST00000486753 483 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC010409.1-201ENST00000487382 476 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-970P-201ENST00000516312 107 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SNORA31.17-201ENST00000516953 127 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC106038.2-201ENST00000520706 568 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC023050.3-201ENST00000541142 333 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC009094.1-201ENST00000564443 426 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 MIR3136-201ENST00000583498 78 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC008752.3-201ENST00000588113 712 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC005786.1-201ENST00000588553 154 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL590229.1-201ENST00000603497 542 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC107304.1-201ENST00000604229 296 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC024933.1-201ENST00000608472 348 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC120349.3-201ENST00000624377 529 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 ZNF72P-201ENST00000425869 1908 ntBASIC1.11□□□□□ -2.23
IGHV3-43A0A0B4J1X8 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 ZNF209P-201ENST00000593450 2304 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-336P-201ENST00000364891 107 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 Y_RNA.332-201ENST00000365271 113 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-26P-201ENST00000383985 107 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-142P-201ENST00000384019 107 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-43P-201ENST00000384302 107 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-692P-201ENST00000384496 107 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SNORA11.2-201ENST00000408318 127 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL590135.1-201ENST00000422215 156 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC019205.3-201ENST00000424573 156 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL669831.1-202ENST00000428504 417 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 GTF2IP13-201ENST00000438487 386 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC016700.2-201ENST00000446011 156 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 FTH1P25-201ENST00000447665 469 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU1-98P-201ENST00000458992 160 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC005908.1-201ENST00000468701 347 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms