Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 AC084824.5-201ENST00000612009 413 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 AL359547.2-201ENST00000615810 418 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 AC091895.1-201ENST00000624494 256 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 OR4G3P-201ENST00000633500 913 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 MIR544A-201ENST00000384855 91 ntBASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 MIR194-1-201ENST00000384892 85 ntBASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 RN7SKP61-201ENST00000410642 295 ntBASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 RPS27P1-201ENST00000450552 247 ntBASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU6-351P-201ENST00000516097 100 ntBASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 SCARNA16.2-201ENST00000516520 172 ntBASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 AL158032.1-201ENST00000605401 106 ntBASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 AL022345.2-201ENST00000606307 135 ntBASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU6-87P-201ENST00000607561 108 ntBASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 RMST_7.1-201ENST00000621935 268 ntBASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 AC005858.4-201ENST00000623191 700 ntBASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
TMEM56-RWDD3S4R434 Y_RNA.46-201ENST00000362695 102 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU6-862P-201ENST00000362804 105 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 Y_RNA.110-201ENST00000363220 99 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 SNORA63D-201ENST00000364359 132 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU6-1019P-201ENST00000364424 107 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 Y_RNA.327-201ENST00000365201 102 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 Y_RNA.465-201ENST00000384293 102 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 ERHP2-201ENST00000402323 299 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 FGF7P8-201ENST00000402994 292 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 MTND4P20-201ENST00000424125 869 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 AC092473.1-201ENST00000441098 221 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 AC010587.2-201ENST00000511727 448 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 CYCSP23-201ENST00000519781 313 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 AL034555.1-201ENST00000604816 211 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 MIR3976-201ENST00000606807 139 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 AC144521.1-201ENST00000607148 956 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 AL451064.1-201ENST00000607718 471 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 AC083806.3-201ENST00000614016 455 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 AC026585.1-201ENST00000619582 524 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.7□□□□□ -2.3
TMEM56-RWDD3S4R434 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU6-78P-201ENST00000362897 107 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU6-438P-201ENST00000365561 103 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 MIR578-201ENST00000384828 96 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 MIR532-201ENST00000385025 91 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 RPS4XP11-201ENST00000446897 772 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 AC103851.1-201ENST00000506833 274 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 ATP5EP1-201ENST00000510257 156 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 MTCO3P28-201ENST00000513351 515 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 RNA5SP503-201ENST00000517047 117 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 AC115990.1-201ENST00000526957 301 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 AC123904.2-201ENST00000548059 300 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 MIR3664-201ENST00000579074 99 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 AC104073.3-201ENST00000610942 955 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 AC131159.1-201ENST00000621854 213 ntBASIC0.69□□□□□ -2.3
TMEM56-RWDD3S4R434 AL159152.1-201ENST00000635019 2587 ntBASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU6-433P-201ENST00000363216 104 ntBASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 AL591043.1-201ENST00000432461 424 ntBASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 ATP5J2P3-201ENST00000451550 258 ntBASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 MTND3P5-201ENST00000512798 333 ntBASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 AC013244.2-201ENST00000603396 103 ntBASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 FAM71BP1-201ENST00000604431 523 ntBASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 AL021368.1-201ENST00000607490 540 ntBASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 PART1_2.1-201ENST00000612397 250 ntBASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 MIR6715A-201ENST00000615929 79 ntBASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 AP002782.1-201ENST00000623107 614 ntBASIC0.68□□□□□ -2.3
TMEM56-RWDD3S4R434 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU6-1285P-201ENST00000363480 105 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 SNORA4.1-201ENST00000364263 144 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 RNY4P16-201ENST00000364768 94 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU6-1176P-201ENST00000390955 107 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms