Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 RNU1-100P-201ENST00000365255 165 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 RNU6-213P-201ENST00000384051 104 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 Y_RNA.435-201ENST00000384095 112 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 RNU6-394P-201ENST00000410735 107 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 AC074117.2-201ENST00000417130 397 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 AL358075.3-201ENST00000426289 226 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 AC007969.2-201ENST00000441891 191 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 UQCRBP2-201ENST00000447827 297 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 S100A11P1-201ENST00000477525 312 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 RNA5SP164-201ENST00000516533 110 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 AP005660.1-201ENST00000522972 293 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 MIR6134-201ENST00000617606 109 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 AC112200.1-201ENST00000625015 234 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 AC058791.1-201ENST00000608412 3198 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 AL133412.1-201ENST00000380194 2992 ntBASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 SNORD115-8-201ENST00000363856 82 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 SNORD115-38-201ENST00000365037 82 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 Y_RNA.308-201ENST00000365043 101 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 MIR544A-201ENST00000384855 91 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 U3.19-201ENST00000390893 196 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 PPIAP31-201ENST00000405422 495 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 RNA5SP317-201ENST00000410176 116 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 RNA5SP311-201ENST00000411290 116 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 NDUFB4P6-201ENST00000436819 366 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 AC125238.1-201ENST00000448842 249 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 RPS4XP22-201ENST00000480755 780 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 AC110768.1-201ENST00000509222 400 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 RN7SKP122-201ENST00000515923 296 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 RNY3P16-201ENST00000516338 101 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 RNA5SP315-201ENST00000516340 116 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 RNA5SP312-201ENST00000517068 116 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 CR383656.8-201ENST00000549046 145 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 AP000553.6-201ENST00000641242 118 ntBASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CAPN6Q9Y6Q1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 RNA5SP197-201ENST00000363357 119 ntBASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 RNU6-1141P-201ENST00000364520 107 ntBASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 Y_RNA.398-201ENST00000383952 99 ntBASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 MIR585-201ENST00000384887 94 ntBASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 Y_RNA.597-201ENST00000410463 100 ntBASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 HMGB3P8-201ENST00000449709 577 ntBASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 AC020593.1-201ENST00000507399 299 ntBASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 RNU6-1219P-201ENST00000516143 112 ntBASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 AC005828.6-201ENST00000606610 232 ntBASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 AC022149.2-201ENST00000621061 203 ntBASIC3.85□□□□□ -1.79
CAPN6Q9Y6Q1 AC068647.1-201ENST00000489539 2265 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AC126755.2-208ENST00000327792 462 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AC138969.1-213ENST00000331436 462 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 MIR372-201ENST00000362225 67 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 FTH1P15-201ENST00000406984 280 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 Y_RNA.595-201ENST00000410403 105 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 RN7SKP61-201ENST00000410642 295 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AL159169.1-201ENST00000421119 127 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AC005042.3-201ENST00000453230 174 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AL645939.1-201ENST00000453429 797 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AC010618.1-201ENST00000469924 477 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AC011602.1-201ENST00000546484 331 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AC087499.8-201ENST00000578406 226 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 MIR4308-201ENST00000580634 81 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 MIR4443-201ENST00000585052 53 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 AC012468.1-201ENST00000604888 430 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 uc_338.32-201ENST00000615087 172 ntBASIC3.84□□□□□ -1.79
CAPN6Q9Y6Q1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms