Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.86□□□□□ -1.95
DTX4Q9Y2E6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.86□□□□□ -1.95
DTX4Q9Y2E6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
DTX4Q9Y2E6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.86□□□□□ -1.95
DTX4Q9Y2E6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DTX4Q9Y2E6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
DTX4Q9Y2E6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 RNU6-227P-201ENST00000362865 103 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 SNORA22B-201ENST00000383876 138 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 RNU6-738P-201ENST00000384531 106 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 RNU6-748P-201ENST00000384648 107 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 SNORD15B-201ENST00000384714 146 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 RNU6-331P-201ENST00000384724 107 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 MIR147B-201ENST00000390185 80 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 RNU6-308P-201ENST00000390957 107 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 NDUFB4P4-201ENST00000404822 243 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 RPL19P1-201ENST00000411635 428 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 HMGN2P35-201ENST00000412164 270 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 RPL32P35-201ENST00000415214 394 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 RPL23AP50-201ENST00000434149 455 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 RPL39P40-201ENST00000445481 146 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 MIR2053-201ENST00000459295 91 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 RPS29P12-201ENST00000460178 152 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 RN7SL20P-201ENST00000488827 297 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 RNA5SP76-201ENST00000516277 87 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 AL355802.3-201ENST00000607571 545 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 AC092608.2-201ENST00000624427 218 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 AC110079.1-202ENST00000635213 138 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 AL353743.1-202ENST00000431724 1695 ntBASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DTX4Q9Y2E6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 RBBP8P1-201ENST00000449447 1844 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 U3.6-201ENST00000363622 211 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 RNU6-596P-201ENST00000365395 98 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 RNU6-1160P-201ENST00000384546 104 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 MIR544A-201ENST00000384855 91 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 BTF3L4P2-201ENST00000392798 346 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 AL133475.1-201ENST00000404414 305 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 RNA5SP492-201ENST00000411330 114 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 USMG5P1-201ENST00000425964 177 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 AL137792.2-201ENST00000443484 235 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 AC097462.2-201ENST00000504623 481 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 RAC1P5-201ENST00000512182 576 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 RNA5SP384-201ENST00000516615 116 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 MIR4325-201ENST00000583049 90 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 AL391813.1-201ENST00000603098 260 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 AP001836.1-201ENST00000604675 523 ntBASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.84□□□□□ -1.95
DTX4Q9Y2E6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
DTX4Q9Y2E6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
DTX4Q9Y2E6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 HAUS6P2-201ENST00000433254 2404 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 SNORD56.5-201ENST00000364281 72 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 SNORA63C-201ENST00000364578 129 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 RNU1-140P-201ENST00000365040 165 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 RNU6-890P-201ENST00000384121 107 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 RNU6-174P-201ENST00000410406 106 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 AP000275.1-201ENST00000411943 390 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 PMCHL1-202ENST00000423102 261 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 AC004383.1-201ENST00000438135 289 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 AC007969.2-201ENST00000441891 191 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 RPS29P27-201ENST00000463711 170 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 FO393415.2-201ENST00000480085 343 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 AP001025.1-201ENST00000486139 332 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 SCARNA16.2-201ENST00000516520 172 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 RNU5B-3P-201ENST00000516601 115 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 RNU6-307P-201ENST00000516743 106 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 RNU6-988P-201ENST00000519081 107 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 HSPE1P20-201ENST00000538133 289 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 AC005899.2-201ENST00000584353 90 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 UCA1.1-201ENST00000620952 75 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 AC007318.2-201ENST00000620999 243 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 MIR622-201ENST00000638396 96 ntBASIC2.83□□□□□ -1.96
DTX4Q9Y2E6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms