Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CYP2C59P-201ENST00000457790 269 ntBASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 SNRPFP3-201ENST00000457792 225 ntBASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 AL163973.1-201ENST00000484753 577 ntBASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 SNORA40.12-201ENST00000516329 111 ntBASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 SNORA48.11-201ENST00000517015 89 ntBASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 AC023050.3-201ENST00000541142 333 ntBASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 AC024614.2-201ENST00000577584 372 ntBASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 MIR4287-201ENST00000579398 78 ntBASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 AP001330.5-201ENST00000607176 411 ntBASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 Z99129.1-201ENST00000612510 255 ntBASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 uc_338.15-201ENST00000615470 191 ntBASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 AL159153.1-201ENST00000619688 317 ntBASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAPPC4Q9Y296 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 Y_RNA.40-201ENST00000362645 93 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 SNORD56.1-201ENST00000362913 68 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-529P-201ENST00000363383 104 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 RNA5SP240-201ENST00000365355 128 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-259P-201ENST00000383999 107 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 RNU2-16P-201ENST00000410712 136 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 MTCYBP8-201ENST00000422855 651 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AL161788.1-201ENST00000441805 169 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC013470.1-201ENST00000453438 462 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC079140.5-201ENST00000507882 310 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 RNU2-53P-201ENST00000516257 147 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC118273.2-201ENST00000532092 465 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC024909.2-201ENST00000553035 286 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC007375.1-201ENST00000554513 578 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 MIR5583-1-201ENST00000580941 59 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 MIR3941-201ENST00000582572 103 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 MIR4424-201ENST00000585257 86 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 RPL30P11-203ENST00000598995 310 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AL096840.1-201ENST00000603287 93 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC012507.3-201ENST00000603556 477 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC123912.5-201ENST00000605470 343 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC080013.6-201ENST00000606185 215 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC104073.3-201ENST00000610942 955 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 AC087241.4-201ENST00000612441 480 ntBASIC1.7□□□□□ -2.14
TRAPPC4Q9Y296 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 AC002543.1-201ENST00000299783 1954 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-37P-201ENST00000362692 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-105P-201ENST00000363909 104 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-266P-201ENST00000364225 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-11P-201ENST00000364234 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU4-24P-201ENST00000364565 139 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 Y_RNA.255-201ENST00000364581 97 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-25P-201ENST00000383873 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-1-201ENST00000383898 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-48P-201ENST00000384161 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-36P-201ENST00000384172 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-4P-201ENST00000384205 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-5P-201ENST00000384238 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-3P-201ENST00000384314 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-16P-201ENST00000384385 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-15P-201ENST00000384534 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-2-201ENST00000384627 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-29P-201ENST00000384637 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-9-201ENST00000384776 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU6-33P-201ENST00000384793 107 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 SNORD56-201ENST00000413522 71 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 AIMP1P2-201ENST00000425294 312 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 AL606489.2-201ENST00000433886 234 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 FDX1P2-201ENST00000450769 375 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 PMCHL2-203ENST00000457791 237 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 RNU7-167P-201ENST00000459160 62 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 UBL5P3-201ENST00000475112 231 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 AL121594.1-201ENST00000475906 575 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 HMGB3P17-201ENST00000504195 649 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 COPS8P3-201ENST00000526024 482 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 AC022880.1-201ENST00000534017 973 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 IMMP1LP2-201ENST00000552954 492 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 AC093249.1-201ENST00000567049 203 ntBASIC1.69□□□□□ -2.14
TRAPPC4Q9Y296 MIR4529-201ENST00000578110 78 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms