Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 HMGN2P38-201ENST00000423806 265 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 RPL7P12-201ENST00000446719 750 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 AC012308.1-201ENST00000451232 178 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 AL122001.1-201ENST00000457027 370 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 AC006026.2-201ENST00000457376 180 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 SCARNA18-201ENST00000459004 134 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 RNU7-63P-201ENST00000459054 62 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 RNU7-180P-201ENST00000459240 63 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 AC140059.1-201ENST00000489238 361 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 MTND3P5-201ENST00000512798 333 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 SNORA40.12-201ENST00000516329 111 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 RNU6-250P-201ENST00000516958 103 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 AC109329.1-201ENST00000518744 317 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 AL137161.1-201ENST00000532231 390 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 AL138963.2-201ENST00000605137 226 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 AC096772.1-201ENST00000609146 564 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 AC093788.1-201ENST00000609356 927 ntBASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
UBQLN1Q9UMX0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.1
UBQLN1Q9UMX0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
UBQLN1Q9UMX0 SNORD114-19-201ENST00000363072 75 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 Y_RNA.194-201ENST00000363985 102 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 SNORA16B-201ENST00000364674 135 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 RNU6-996P-201ENST00000365438 107 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 RNU6-1042P-201ENST00000384204 107 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 RNU6-434P-201ENST00000384376 107 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 OR9R1P-201ENST00000412200 877 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 UBE2V1P10-201ENST00000414685 269 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 MTCYBP8-201ENST00000422855 651 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 HMGB1P31-201ENST00000437242 427 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 PRPS1P1-201ENST00000445305 876 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 SNRPFP3-201ENST00000457792 225 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 MTCO3P7-201ENST00000510008 774 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 SNORA25.17-201ENST00000517184 124 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 CYCSP26-201ENST00000534107 320 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 HIF1AP1-201ENST00000553642 175 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 AC090897.2-201ENST00000581715 130 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 MIR4424-201ENST00000585257 86 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 AL354685.2-201ENST00000448218 1447 ntBASIC1.9□□□□□ -2.11
UBQLN1Q9UMX0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 MIR95-201ENST00000385072 81 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 RNA5SP390-201ENST00000410191 113 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 RNU2-63P-201ENST00000410792 194 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AC138623.1-201ENST00000418060 216 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AC008267.5-201ENST00000424928 265 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AL365400.1-201ENST00000431854 640 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AL645568.3-201ENST00000433683 316 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AL606489.2-201ENST00000433886 234 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AL163973.1-201ENST00000484753 577 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 SNORA25.15-201ENST00000516487 89 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AP003392.2-201ENST00000527269 208 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AC104383.1-201ENST00000530297 370 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AC118273.2-201ENST00000532092 465 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 OR11H5P-201ENST00000554039 926 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 ANP32BP3-201ENST00000559213 706 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 MIR4419B-201ENST00000577260 68 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 MIR3683-201ENST00000580847 82 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 MIR5583-1-201ENST00000580941 59 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AC012507.3-201ENST00000603556 477 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 AL713866.2-201ENST00000603579 219 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 U4atac.1-201ENST00000618345 95 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 U4.7-201ENST00000638126 106 ntBASIC1.89□□□□□ -2.11
UBQLN1Q9UMX0 Y_RNA.255-201ENST00000364581 97 ntBASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 Y_RNA.480-201ENST00000384364 102 ntBASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 RNU1-57P-201ENST00000384491 166 ntBASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 Y_RNA.559-201ENST00000384686 107 ntBASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 MIR186-201ENST00000384988 86 ntBASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 AL627390.1-201ENST00000396055 340 ntBASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 AC016691.1-201ENST00000441321 413 ntBASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 AC007969.2-201ENST00000441891 191 ntBASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 CKS1BP2-201ENST00000497342 240 ntBASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.88□□□□□ -2.11
UBQLN1Q9UMX0 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms