Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC069113.1-201ENST00000517763 267 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 AC109479.2-201ENST00000517842 174 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 MIR4300-201ENST00000581016 96 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 AP001148.1-201ENST00000624124 2359 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.400-201ENST00000383963 111 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.458-201ENST00000384240 102 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.480-201ENST00000384364 102 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 MIR628-201ENST00000385229 95 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.580-201ENST00000391004 95 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 RNU6-837P-201ENST00000391056 108 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 AC021205.2-201ENST00000480069 347 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 AC010469.2-201ENST00000496412 480 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 RN7SKP60-201ENST00000516985 239 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 AMZ2P1-203ENST00000565833 850 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 TUG1_4.1-201ENST00000619464 181 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 AC099506.2-201ENST00000623074 221 ntBASIC4.74□□□□□ -1.65
COL17A1Q9UMD9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 RNU6-151P-201ENST00000364158 107 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.218-201ENST00000364218 104 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 RNU6-923P-201ENST00000364753 107 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.441-201ENST00000384123 112 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 SNORD67-201ENST00000390833 111 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 RPL21P40-201ENST00000428586 483 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 RPL37P4-201ENST00000448908 268 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 AC117440.1-201ENST00000474107 571 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 RNU6-1095P-201ENST00000516148 108 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 OR4H12P-201ENST00000556269 907 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 AC090617.3-201ENST00000573670 475 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 MIR5692A1-201ENST00000580523 69 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 SNORD39.4-201ENST00000620099 78 ntBASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL17A1Q9UMD9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.71-201ENST00000362892 104 ntBASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 SNORA70E-201ENST00000384492 135 ntBASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 AL139039.1-201ENST00000401900 692 ntBASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 GAPDHP27-201ENST00000447427 1020 ntBASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 RPS3P1-201ENST00000456781 192 ntBASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 snoU13.23-201ENST00000458863 104 ntBASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 AC092436.3-201ENST00000511788 257 ntBASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.686-201ENST00000516548 134 ntBASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.802-201ENST00000614892 130 ntBASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 AP000560.1-201ENST00000624150 1937 ntBASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL17A1Q9UMD9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 AC073325.2-201ENST00000339545 159 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 Y_RNA.215-201ENST00000364204 112 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 AP002088.1-201ENST00000382740 395 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 RNU6-817P-201ENST00000391083 104 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 RPS4XP7-201ENST00000406274 780 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 MTCYBP2-201ENST00000407745 171 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 RNU2-43P-201ENST00000410306 190 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 Y_RNA.602-201ENST00000410535 92 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 RNU5E-9P-201ENST00000411164 104 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 AL357552.1-201ENST00000445254 415 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 HSPE1P6-201ENST00000479457 291 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 AC087190.1-201ENST00000484462 480 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 AC107032.1-201ENST00000485945 480 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 Y_RNA.687-201ENST00000516558 91 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 SCARNA20.6-201ENST00000517251 106 ntBASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL17A1Q9UMD9 RNY4P18-201ENST00000391107 89 ntBASIC4.7□□□□□ -1.66
COL17A1Q9UMD9 RNU6-651P-201ENST00000411040 105 ntBASIC4.7□□□□□ -1.66
COL17A1Q9UMD9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.7□□□□□ -1.66
COL17A1Q9UMD9 UBE2V1P4-201ENST00000425374 344 ntBASIC4.7□□□□□ -1.66
COL17A1Q9UMD9 AL645568.3-201ENST00000433683 316 ntBASIC4.7□□□□□ -1.66
COL17A1Q9UMD9 AP001324.2-201ENST00000461163 319 ntBASIC4.7□□□□□ -1.66
COL17A1Q9UMD9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.7□□□□□ -1.66
COL17A1Q9UMD9 RNU6-971P-201ENST00000516920 106 ntBASIC4.7□□□□□ -1.66
COL17A1Q9UMD9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms