Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 SUMO1P3-201ENST00000439961 304 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AP000705.1-201ENST00000454567 350 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AL139109.1-201ENST00000455491 297 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 HMGN2P7-201ENST00000456186 273 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AK6P2-201ENST00000549020 471 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AC130289.1-201ENST00000577321 73 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AL138963.2-201ENST00000605137 226 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AC005296.1-201ENST00000616145 209 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 MIR7151-201ENST00000617477 60 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 MIR6076-201ENST00000617521 113 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 MIR7702-201ENST00000621931 59 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AC073308.1-201ENST00000623696 305 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDC42EP3Q9UKI2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.34□□□□□ -1.88
CDC42EP3Q9UKI2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDC42EP3Q9UKI2 AC010680.1-201ENST00000590024 3590 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 RNU4-90P-201ENST00000362773 141 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 RNU6-1062P-201ENST00000383908 107 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 SNORA36A-201ENST00000384221 132 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 Y_RNA.602-201ENST00000410535 92 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 AC023141.4-201ENST00000412031 328 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 RPL23AP82-202ENST00000427528 469 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 WARS2P1-201ENST00000429678 537 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 AC244670.1-201ENST00000436879 112 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 RN7SL323P-201ENST00000494712 295 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 RPL29P14-201ENST00000495837 428 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 GZMAP1-201ENST00000503054 631 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 SERF1AP1-201ENST00000514575 187 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 RNU1-95P-201ENST00000516357 160 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 RNU1-128P-201ENST00000516704 160 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 RNU6-182P-201ENST00000516970 105 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 AC021231.3-201ENST00000558497 370 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 HMGN2P15-201ENST00000585707 270 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 AC073657.2-201ENST00000605661 303 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 OTUD4P1-201ENST00000237841 3067 ntBASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.33□□□□□ -1.88
CDC42EP3Q9UKI2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 Y_RNA.277-201ENST00000364754 102 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 RNA5SP97-201ENST00000365006 84 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 RNU6-926P-201ENST00000384075 107 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 SNORA5A-201ENST00000384111 134 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 RNU6-541P-201ENST00000384709 110 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 MIR487A-201ENST00000385009 80 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 AC017083.1-201ENST00000428093 483 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 RPL39P29-201ENST00000447779 157 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 RNU5F-8P-201ENST00000515941 111 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 SNORA81.3-201ENST00000517283 198 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 UBL5P4-201ENST00000562584 236 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 U2.14-201ENST00000615943 113 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 AL138880.2-201ENST00000616214 239 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 AF117829.1-206ENST00000621883 3802 ntBASIC3.32□□□□□ -1.88
CDC42EP3Q9UKI2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 RBBP8P1-201ENST00000449447 1844 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 RNU6-1159P-201ENST00000362933 107 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 RNA5SP197-201ENST00000363357 119 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 Y_RNA.555-201ENST00000384673 110 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 MIR30B-201ENST00000384850 88 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 SNORD66.1-201ENST00000391230 76 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 SNORA3C-201ENST00000408792 125 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 RNU5A-5P-201ENST00000411054 116 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 CYCSP48-201ENST00000417124 323 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 MTND5P15-201ENST00000434246 349 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 HMGB1P37-201ENST00000439613 609 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 AL161651.1-201ENST00000440882 223 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 AC006011.1-201ENST00000442758 349 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 SEPT14P8-201ENST00000508026 178 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms