Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 LINC01399-202ENST00000458450 244 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 RNU7-87P-201ENST00000459343 62 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 RN7SL594P-201ENST00000470590 287 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 MIR5571-201ENST00000577998 113 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 AC010928.2-201ENST00000588017 287 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 ADAM3A-203ENST00000461344 2157 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 AC010615.1-201ENST00000594254 1764 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 Y_RNA.552-201ENST00000384665 112 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 AC078809.1-201ENST00000427601 140 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 GOT2P5-201ENST00000433995 546 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 Z82188.1-201ENST00000436709 154 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 RNU2-27P-201ENST00000516185 142 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 SNORA31.23-201ENST00000517219 133 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 MRPS36P4-201ENST00000534436 298 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 AC005357.1-201ENST00000588399 301 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 HSPE1P7-201ENST00000604681 321 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 SNORA50A-202ENST00000629536 136 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 U6.92-201ENST00000636464 89 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 MFSD8-236ENST00000641509 4050 ntBASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.66□□□□□ -1.82
PPARGC1AQ9UBK2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.65□□□□□ -1.82
PPARGC1AQ9UBK2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.65□□□□□ -1.82
PPARGC1AQ9UBK2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PPARGC1AQ9UBK2 Y_RNA.14-201ENST00000362415 103 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 Y_RNA.439-201ENST00000384119 94 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 Y_RNA.483-201ENST00000384380 101 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 SNORD78.2-201ENST00000391076 69 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 RNU1-139P-201ENST00000391307 165 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 EI24P2-201ENST00000397776 1076 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 RNA5SP390-201ENST00000410191 113 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-130P-201ENST00000411112 103 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 RBMY2UP-201ENST00000453474 324 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 TOMM22P6-201ENST00000465035 409 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 RPL30P1-201ENST00000488676 339 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 AC016632.1-201ENST00000503994 196 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 SNORA70.18-201ENST00000516696 98 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 AP006245.1-201ENST00000522549 120 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 AC007458.1-201ENST00000542812 373 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 AC006199.1-201ENST00000548728 219 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 Y_RNA.772-201ENST00000606692 102 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 AC099778.2-201ENST00000610904 211 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 AL049781.1-201ENST00000623195 3585 ntBASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PPARGC1AQ9UBK2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 AC092268.1-201ENST00000342691 405 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-858P-201ENST00000362436 107 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 Y_RNA.26-201ENST00000362539 101 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 RNU5B-2P-201ENST00000363036 113 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-806P-201ENST00000365147 105 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 SNORA29-201ENST00000384183 140 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-708P-201ENST00000384217 107 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 Y_RNA.478-201ENST00000384358 107 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 MIR449B-201ENST00000384995 97 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 DBIP2-201ENST00000419076 262 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 AC091286.1-201ENST00000431233 461 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 Z98949.2-201ENST00000440996 144 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 AC012308.1-201ENST00000451232 178 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 AC087477.1-201ENST00000465747 340 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 RPL39P38-201ENST00000467018 153 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 TRBVB-201ENST00000477100 408 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 RPS29P20-201ENST00000489592 171 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 AC010469.2-201ENST00000496412 480 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 RNU5F-8P-201ENST00000515941 111 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-1023P-201ENST00000516137 106 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-1198P-201ENST00000516904 67 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 SNORD19.2-201ENST00000516978 73 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 AC093023.1-201ENST00000547375 507 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 SNORA43.4-201ENST00000629559 138 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms