Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 VN1R87P-201ENST00000596706 487 ntBASIC0.37□□□□□ -2.35
COMMD3Q9UBI1 VN1R82P-201ENST00000601481 356 ntBASIC0.37□□□□□ -2.35
COMMD3Q9UBI1 AL136363.2-201ENST00000604173 851 ntBASIC0.37□□□□□ -2.35
COMMD3Q9UBI1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.37□□□□□ -2.35
COMMD3Q9UBI1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.37□□□□□ -2.35
COMMD3Q9UBI1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 SNORD3E-201ENST00000362899 217 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 SNORD116-20-201ENST00000384529 92 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 RAP1BP3-201ENST00000407180 549 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 FCF1P10-201ENST00000407590 479 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 TIMM9P2-201ENST00000419324 266 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AL953862.1-201ENST00000423016 168 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AL008629.1-201ENST00000438615 184 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AC069257.2-201ENST00000441819 155 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AP000542.1-201ENST00000448473 371 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AL583843.1-201ENST00000456070 346 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 SNRPFP3-201ENST00000457792 225 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 snoU13.30-201ENST00000458951 104 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 MTND1P3-201ENST00000484956 952 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 MTND2P33-201ENST00000506452 1031 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 RNY4P37-201ENST00000516225 96 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 RNU4-54P-201ENST00000516428 129 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 RN7SKP49-201ENST00000516675 260 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 RPL21P136-201ENST00000605378 396 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 RNU6-87P-201ENST00000607561 108 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AC104465.1-201ENST00000611365 139 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 AC243994.1-201ENST00000618627 109 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 SCARNA4-202ENST00000625402 129 ntBASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.36□□□□□ -2.35
COMMD3Q9UBI1 RNU4-79P-201ENST00000362764 141 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 RNU4-12P-201ENST00000365233 139 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 Y_RNA.623-201ENST00000411128 95 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 BTF3L4P1-201ENST00000413813 468 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 MTCO1P21-201ENST00000416634 589 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 RAB28P5-201ENST00000427490 651 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AL627311.1-201ENST00000431514 115 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AC002429.1-201ENST00000437672 148 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 NDUFB1P2-201ENST00000449477 176 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 ZNF886P-201ENST00000450781 723 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 SNORA31.4-201ENST00000516049 129 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AC104417.1-201ENST00000523974 751 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 DEFB108A-201ENST00000530110 222 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AC025423.5-201ENST00000550230 219 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AC098483.2-201ENST00000603158 454 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AC083806.3-201ENST00000614016 455 ntBASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.35□□□□□ -2.35
COMMD3Q9UBI1 AC068700.1-201ENST00000565862 3754 ntBASIC0.34□□□□□ -2.35
COMMD3Q9UBI1 AL391994.1-201ENST00000254724 282 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 OR4G2P-201ENST00000328113 903 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 MIR412-201ENST00000362142 91 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 Y_RNA.124-201ENST00000363339 93 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 RNA5SP499-201ENST00000363982 119 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 RNU6-289P-201ENST00000364093 107 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 MTCO3P29-201ENST00000432119 779 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AL591212.2-201ENST00000433923 257 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 MTCYBP42-201ENST00000444653 1130 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 ATP5J2P3-201ENST00000451550 258 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AL590705.4-201ENST00000532209 134 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AL121579.1-201ENST00000555129 305 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AL353778.1-201ENST00000603149 408 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AC136443.5-201ENST00000603741 370 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AL022154.1-201ENST00000604698 785 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AC018889.1-201ENST00000605372 397 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 MIR3976-201ENST00000606807 139 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AC022893.3-201ENST00000607665 437 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AL451064.1-201ENST00000607718 471 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 AL355816.2-201ENST00000610049 647 ntBASIC0.34□□□□□ -2.36
COMMD3Q9UBI1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 RNU6-1123P-201ENST00000362347 106 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 RNU5A-8P-201ENST00000364102 114 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AL359704.1-201ENST00000411586 781 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AL355994.1-201ENST00000424379 260 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms