Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 SNORD114-19-201ENST00000363072 75 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.418-201ENST00000384029 102 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 RNU6-1310P-201ENST00000384153 107 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 AL133475.1-201ENST00000404414 305 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 AC096649.2-201ENST00000416186 393 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 RPL23AP3-201ENST00000453844 468 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.638-201ENST00000459374 113 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 AL049873.1-201ENST00000480540 376 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 AC107393.1-201ENST00000512403 346 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 SNORD116-28-201ENST00000516123 91 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 SCARNA14-201ENST00000516903 136 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 RNA5SP179-201ENST00000517284 121 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 AC025627.2-201ENST00000576220 160 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 MIR4282-201ENST00000583613 67 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 AC091167.4-201ENST00000605079 184 ntBASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 AC010889.1-201ENST00000566193 2666 ntBASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 AC087190.4-201ENST00000574616 8334 ntBASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 RNU6-1010P-201ENST00000362757 107 ntBASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 RNU6-799P-201ENST00000363567 107 ntBASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 SNORA18.3-201ENST00000384122 132 ntBASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 PCNPP3-201ENST00000393579 471 ntBASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 AL591473.1-201ENST00000464297 313 ntBASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 AC091179.3-201ENST00000474761 144 ntBASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 AC104619.4-201ENST00000510773 249 ntBASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.34□□□□□ -1.71
CXXC1Q9P0U4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
CXXC1Q9P0U4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
CXXC1Q9P0U4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.34□□□□□ -1.72
CXXC1Q9P0U4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 RNU1-62P-201ENST00000362599 164 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 RNU6-662P-201ENST00000384253 104 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 RNU6-1289P-201ENST00000384431 106 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 CBX3P9-201ENST00000402326 552 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 SNORA3.3-201ENST00000408712 125 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 RNA5SP38-201ENST00000410750 119 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 RPL19P1-201ENST00000411635 428 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 AL035423.1-201ENST00000420331 213 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 RAB28P5-201ENST00000427490 651 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 IFNA11P-201ENST00000446352 526 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 AC108751.2-201ENST00000469993 231 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 AC087441.2-201ENST00000529141 262 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 YPEL5P3-201ENST00000547227 352 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 AC027176.1-201ENST00000560204 514 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 AC012493.2-201ENST00000595083 291 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 AC072026.1-201ENST00000605023 201 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 MIR6852-201ENST00000621699 66 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 AC006111.3-201ENST00000622137 383 ntBASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXXC1Q9P0U4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 AC092593.1-201ENST00000515413 1815 ntBASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 UBE3AP2-201ENST00000429033 2259 ntBASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 RNU6-746P-201ENST00000384112 109 ntBASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 COX6CP10-201ENST00000416832 224 ntBASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 SNORA71B-202ENST00000439232 272 ntBASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 AL392103.1-201ENST00000447000 198 ntBASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 AP001486.1-201ENST00000463339 476 ntBASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 AC022795.1-201ENST00000473808 480 ntBASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 RPL29P14-201ENST00000495837 428 ntBASIC4.32□□□□□ -1.72
CXXC1Q9P0U4 RNU6-406P-201ENST00000516470 107 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms