Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 AL050343.2-201ENST00000607338 280 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
VAPAQ9P0L0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.17□□□□□ -2.22
VAPAQ9P0L0 SNORD98-201ENST00000636377 67 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 U4.7-201ENST00000638126 106 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 ICE2P2-201ENST00000483823 2787 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 RNU6-501P-201ENST00000364072 100 ntBASIC1.16□□□□□ -2.22
VAPAQ9P0L0 SNORD1A-201ENST00000364968 72 ntBASIC1.16□□□□□ -2.22
VAPAQ9P0L0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
VAPAQ9P0L0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.16□□□□□ -2.22
VAPAQ9P0L0 MTCO3P41-201ENST00000414801 328 ntBASIC1.16□□□□□ -2.22
VAPAQ9P0L0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.16□□□□□ -2.22
VAPAQ9P0L0 AC139712.2-201ENST00000424302 339 ntBASIC1.16□□□□□ -2.22
VAPAQ9P0L0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.16□□□□□ -2.22
VAPAQ9P0L0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.16□□□□□ -2.22
VAPAQ9P0L0 RPS27AP8-201ENST00000452665 445 ntBASIC1.16□□□□□ -2.22
VAPAQ9P0L0 RNA5SP269-201ENST00000459032 137 ntBASIC1.16□□□□□ -2.22
VAPAQ9P0L0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.16□□□□□ -2.22
VAPAQ9P0L0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.16□□□□□ -2.22
VAPAQ9P0L0 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.16□□□□□ -2.22
VAPAQ9P0L0 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.16□□□□□ -2.22
VAPAQ9P0L0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.16□□□□□ -2.22
VAPAQ9P0L0 PCMTD1P2-201ENST00000565017 355 ntBASIC1.16□□□□□ -2.22
VAPAQ9P0L0 AC110760.3-201ENST00000598794 467 ntBASIC1.16□□□□□ -2.22
VAPAQ9P0L0 AC092140.2-201ENST00000618027 521 ntBASIC1.16□□□□□ -2.22
VAPAQ9P0L0 AL121890.5-201ENST00000620848 304 ntBASIC1.16□□□□□ -2.22
VAPAQ9P0L0 AP000560.1-201ENST00000624150 1937 ntBASIC1.16□□□□□ -2.22
VAPAQ9P0L0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
VAPAQ9P0L0 AC100821.1-201ENST00000523153 2479 ntBASIC1.15□□□□□ -2.22
VAPAQ9P0L0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
VAPAQ9P0L0 Y_RNA.22-201ENST00000362492 102 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 RNU6-179P-201ENST00000363350 107 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 RNU6-105P-201ENST00000363909 104 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 RNU2-3P-201ENST00000410144 191 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 RNU6-607P-201ENST00000411283 108 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.15□□□□□ -2.23
VAPAQ9P0L0 AL365184.2-201ENST00000431139 435 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 UBE2V1P8-201ENST00000437166 265 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 HSPE1P9-201ENST00000440046 311 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 JTBP1-201ENST00000441314 247 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.15□□□□□ -2.23
VAPAQ9P0L0 RPL26P26-201ENST00000480251 434 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 RPL36AP21-201ENST00000490372 323 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 AC022447.4-201ENST00000504053 364 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.15□□□□□ -2.23
VAPAQ9P0L0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.15□□□□□ -2.23
VAPAQ9P0L0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.15□□□□□ -2.23
VAPAQ9P0L0 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.15□□□□□ -2.23
VAPAQ9P0L0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 AC090578.1-201ENST00000604955 591 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.15□□□□□ -2.23
VAPAQ9P0L0 AC241585.2-209ENST00000638217 143 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 MTND5P9-201ENST00000503854 1755 ntBASIC1.15□□□□□ -2.23
VAPAQ9P0L0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.15□□□□□ -2.23
VAPAQ9P0L0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.15□□□□□ -2.23
VAPAQ9P0L0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.14□□□□□ -2.23
VAPAQ9P0L0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
VAPAQ9P0L0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
VAPAQ9P0L0 RNU6-939P-201ENST00000384634 107 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 RNU2-41P-201ENST00000410991 178 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 CYCSP33-201ENST00000414485 327 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 RPS27P16-201ENST00000425758 201 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.14□□□□□ -2.23
VAPAQ9P0L0 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AC243964.1-201ENST00000441814 261 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AL022238.1-201ENST00000442557 355 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AC079448.1-201ENST00000449377 373 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.14□□□□□ -2.23
VAPAQ9P0L0 snoU13.26-201ENST00000459452 105 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 RNU1-92P-201ENST00000517017 135 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 RNU6-685P-201ENST00000517088 95 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 SUMO2P18-201ENST00000518873 252 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.14□□□□□ -2.23
VAPAQ9P0L0 RRN3P3-201ENST00000549207 578 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AC109446.1-201ENST00000566172 220 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 VN1R80P-201ENST00000597126 338 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AL158827.2-201ENST00000602494 330 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AL121992.2-201ENST00000606262 256 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
VAPAQ9P0L0 Z69720.2-201ENST00000624755 279 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AL691447.3-201ENST00000635020 330 ntBASIC1.14□□□□□ -2.23
VAPAQ9P0L0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.13□□□□□ -2.23
VAPAQ9P0L0 MIR340-201ENST00000362125 95 ntBASIC1.13□□□□□ -2.23
VAPAQ9P0L0 RNU6-457P-201ENST00000363999 107 ntBASIC1.13□□□□□ -2.23
VAPAQ9P0L0 RNU6-438P-201ENST00000365561 103 ntBASIC1.13□□□□□ -2.23
VAPAQ9P0L0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.13□□□□□ -2.23
VAPAQ9P0L0 RNU6-116P-201ENST00000384042 109 ntBASIC1.13□□□□□ -2.23
VAPAQ9P0L0 Y_RNA.576-201ENST00000384781 102 ntBASIC1.13□□□□□ -2.23
VAPAQ9P0L0 RNU2-7P-201ENST00000410794 178 ntBASIC1.13□□□□□ -2.23
VAPAQ9P0L0 RNU6-293P-201ENST00000411259 106 ntBASIC1.13□□□□□ -2.23
VAPAQ9P0L0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.13□□□□□ -2.23
VAPAQ9P0L0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms