Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 MTCYBP40-201ENST00000509390 1135 ntBASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 MTCO3P28-201ENST00000513351 515 ntBASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 BNIP3P6-201ENST00000549284 499 ntBASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 AC073539.2-201ENST00000597113 165 ntBASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 AC073410.2-201ENST00000603240 332 ntBASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 U1.36-201ENST00000620684 176 ntBASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 AP000770.2-201ENST00000623694 100 ntBASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 AL359740.1-201ENST00000624340 592 ntBASIC1.85□□□□□ -2.11
HOXC10Q9NYD6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 AL133475.1-201ENST00000404414 305 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 OR9R1P-201ENST00000412200 877 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 RPL21P90-201ENST00000415692 466 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 BX510359.4-201ENST00000423750 193 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 AL451074.3-201ENST00000437709 472 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 AL031667.1-201ENST00000440222 725 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 FAM206BP-201ENST00000510179 541 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 NDUFA5P6-201ENST00000542110 379 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 MTCYBP33-201ENST00000575007 1130 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 AL645939.4-201ENST00000604495 135 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 NDUFA8P1-201ENST00000605525 367 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 AC006566.1-201ENST00000608943 513 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 uc_338.15-201ENST00000615470 191 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 AL159153.1-201ENST00000619688 317 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 AC120349.3-201ENST00000624377 529 ntBASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXC10Q9NYD6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 RNU6-858P-201ENST00000362436 107 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 U3.4-201ENST00000363352 213 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 Y_RNA.169-201ENST00000363745 96 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 SNORD48-201ENST00000364953 64 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 RNU6-550P-201ENST00000391057 101 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 SNORA67.6-201ENST00000391093 99 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 UBE2V1P10-201ENST00000414685 269 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 AL365400.1-201ENST00000431854 640 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 AC022364.2-201ENST00000457963 554 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 RNU7-182P-201ENST00000459009 62 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 MTCO3P9-201ENST00000506989 781 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 AC104806.1-201ENST00000508720 308 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 SNORA18.6-201ENST00000516792 115 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 RPL30P11-203ENST00000598995 310 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 AP001596.2-201ENST00000608410 312 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 AC093788.1-201ENST00000609356 927 ntBASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.83□□□□□ -2.12
HOXC10Q9NYD6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 MIR126-201ENST00000362291 85 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 RNU4-48P-201ENST00000365559 182 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 SNORD116-20-201ENST00000384529 92 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 CBX3P9-201ENST00000402326 552 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 RN7SKP101-201ENST00000411376 320 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 RNA5SP111-201ENST00000411386 101 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 BTF3L4P1-201ENST00000413813 468 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 AL513185.2-201ENST00000425543 193 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 AL669831.1-202ENST00000428504 417 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 AC133104.1-201ENST00000429100 218 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 RPL31P35-201ENST00000431058 377 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 AC000111.3-201ENST00000433478 193 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 AL596276.1-201ENST00000434465 418 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 GTF2IP13-201ENST00000438487 386 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 AC112492.4-201ENST00000456549 352 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 AL121594.1-201ENST00000475906 575 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 RNU2-53P-201ENST00000516257 147 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 RN7SKP256-201ENST00000517201 314 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 uc_338.5-201ENST00000611839 155 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 AC091931.1-201ENST00000623488 728 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 Z69720.2-201ENST00000624755 279 ntBASIC1.82□□□□□ -2.12
HOXC10Q9NYD6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms