Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 SNORA40.19-201ENST00000390846 128 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AL445529.1-201ENST00000398713 389 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 RPL32P28-201ENST00000443577 397 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AK3P2-201ENST00000507976 429 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AC009646.1-201ENST00000510455 318 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 MTND3P5-201ENST00000512798 333 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AC103987.3-201ENST00000582071 292 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AC078899.2-201ENST00000595282 212 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 RNU6-85P-201ENST00000605989 107 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AC063943.3-201ENST00000615562 356 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AL162373.1-201ENST00000620433 407 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 AC068792.1-201ENST00000621354 417 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 MIR6863-201ENST00000636112 90 ntBASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ZCCHC3Q9NUD5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 MTND5P6-201ENST00000422338 1798 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 RNU6-1159P-201ENST00000362933 107 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 RNU6-1322P-201ENST00000364309 107 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 Y_RNA.409-201ENST00000383990 98 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 Y_RNA.481-201ENST00000384373 102 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 RNA5SP219-201ENST00000390940 113 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 SNORA46.1-201ENST00000391069 153 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 RN7SKP61-201ENST00000410642 295 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 AL590556.1-201ENST00000423231 483 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 AL121601.2-201ENST00000438019 707 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 RPL7P54-201ENST00000438336 674 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 PRELID3BP1-201ENST00000457142 540 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 RNU6-261P-201ENST00000459506 102 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 SNORA14.1-201ENST00000516113 141 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 RNU6-965P-201ENST00000516721 96 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 VN1R80P-201ENST00000597126 338 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 AL034555.1-201ENST00000604816 211 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 AL356157.2-201ENST00000605122 111 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 AL359314.1-201ENST00000616913 261 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 AC048344.4-201ENST00000619744 527 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 AC073534.2-201ENST00000620377 381 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 MIR6873-201ENST00000622788 63 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 SNORD98-201ENST00000636377 67 ntBASIC2.01□□□□□ -2.09
ZCCHC3Q9NUD5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 RNU4-15P-201ENST00000362613 141 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 RNU6-82P-201ENST00000363970 107 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 RNU6-142P-201ENST00000384019 107 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 MIR1262-201ENST00000408276 93 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 SNORA11.4-201ENST00000408823 129 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 RPL23AP95-201ENST00000426806 265 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 TRAPPC2P3-201ENST00000443200 321 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 AL031659.1-201ENST00000447075 539 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 RNA5SP233-201ENST00000459153 113 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 RNU7-138P-201ENST00000459479 64 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 MTCO3P38-201ENST00000468910 766 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 RPL21P99-201ENST00000480369 423 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 AC093534.1-201ENST00000504977 132 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 RNU6-189P-201ENST00000516120 101 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 MIR514B-201ENST00000516774 80 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 SNRPGP18-201ENST00000553000 214 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 NDUFAF4P1-201ENST00000559425 519 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 MIR3136-201ENST00000583498 78 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 AL158209.2-201ENST00000619266 216 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 AC124864.2-201ENST00000624736 186 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 OR5AK4P-201ENST00000635912 903 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 IGHVIII-44-202ENST00000636235 289 ntBASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2□□□□□ -2.09
ZCCHC3Q9NUD5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 AL359851.1-201ENST00000569460 4997 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 SNORA69-201ENST00000383895 132 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 MIR634-201ENST00000385208 97 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 SNORD37.1-201ENST00000390968 65 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms