Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RNU6-48P-201ENST00000384161 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-36P-201ENST00000384172 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-4P-201ENST00000384205 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-5P-201ENST00000384238 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-3P-201ENST00000384314 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-16P-201ENST00000384385 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-15P-201ENST00000384534 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-2-201ENST00000384627 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-29P-201ENST00000384637 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-9-201ENST00000384776 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-33P-201ENST00000384793 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 SNORD37.1-201ENST00000390968 65 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNA5SP425-201ENST00000410336 112 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-1140P-201ENST00000410517 106 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 AL591043.1-201ENST00000432461 424 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 UBE2V1P8-201ENST00000437166 265 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 AL161788.1-201ENST00000441805 169 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU2-53P-201ENST00000516257 147 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 CYCSP27-201ENST00000527643 293 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 AL157687.1-201ENST00000554853 619 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 MIR5694-201ENST00000581190 76 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 AC010525.2-201ENST00000590920 195 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 AL162413.1-201ENST00000603198 110 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 RNU6-6P-201ENST00000606623 107 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 AC122108.2-201ENST00000611946 526 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 AL159153.1-201ENST00000619688 317 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 AL359757.2-201ENST00000624309 274 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.8□□□□□ -1.96
SMC4Q9NTJ3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 Y_RNA.167-201ENST00000363735 109 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 Y_RNA.256-201ENST00000364594 104 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 Y_RNA.402-201ENST00000383972 102 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 RNU1-52P-201ENST00000384190 164 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 RN7SKP192-201ENST00000411291 327 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 USP9YP18-201ENST00000425912 695 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 AC090515.1-201ENST00000465295 476 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 AC140059.1-201ENST00000489238 361 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 AC091885.1-201ENST00000506658 268 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 RNA5SP200-201ENST00000516360 103 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 SNORA48.11-201ENST00000517015 89 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 OR11H5P-201ENST00000554039 926 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 APOOP1-201ENST00000604695 592 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 RMST_3.1-201ENST00000611651 109 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 AC008121.3-201ENST00000618726 433 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 FER-210ENST00000628534 558 ntTSL 5 BASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 MIR203B-201ENST00000636080 86 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 MIR3688-2-201ENST00000636963 87 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 AC024614.3-201ENST00000637860 256 ntBASIC2.79□□□□□ -1.96
SMC4Q9NTJ3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 MIRLET7G-201ENST00000362280 84 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 Y_RNA.9-201ENST00000362354 101 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 RNU6-655P-201ENST00000362858 107 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 MIR514A2-201ENST00000385131 88 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 MIR514A3-201ENST00000385132 88 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 FCF1P9-201ENST00000412546 282 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 MTND1P23-201ENST00000416931 372 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 AL121594.1-201ENST00000475906 575 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 RPL21P99-201ENST00000480369 423 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 RNU6-377P-201ENST00000515965 102 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 ZNF519P2-201ENST00000557032 169 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 BNIP3P16-201ENST00000589779 534 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 RPL30P11-203ENST00000598995 310 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 U4.5-201ENST00000617137 123 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 MIR6132-201ENST00000622083 109 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 AC005336.3-201ENST00000623833 2679 ntBASIC2.78□□□□□ -1.96
SMC4Q9NTJ3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
SMC4Q9NTJ3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SMC4Q9NTJ3 Y_RNA.89-201ENST00000363031 102 ntBASIC2.77□□□□□ -1.97
SMC4Q9NTJ3 RNU6-527P-201ENST00000363425 104 ntBASIC2.77□□□□□ -1.97
SMC4Q9NTJ3 RNY3P3-201ENST00000363816 102 ntBASIC2.77□□□□□ -1.97
SMC4Q9NTJ3 RNA5SP219-201ENST00000390940 113 ntBASIC2.77□□□□□ -1.97
SMC4Q9NTJ3 CBX3P9-201ENST00000402326 552 ntBASIC2.77□□□□□ -1.97
SMC4Q9NTJ3 AL117339.3-201ENST00000418733 162 ntBASIC2.77□□□□□ -1.97
SMC4Q9NTJ3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.77□□□□□ -1.97
SMC4Q9NTJ3 SEPT14P3-201ENST00000439401 183 ntBASIC2.77□□□□□ -1.97
SMC4Q9NTJ3 AL732372.2-207ENST00000445840 183 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms