Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 RNU6-1280P-201ENST00000365211 107 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 RNU5E-7P-201ENST00000365290 117 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 RNU6-827P-201ENST00000365553 106 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 RNU6-306P-201ENST00000384617 107 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 SNORA46-201ENST00000384762 135 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 MIR517A-201ENST00000385001 87 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS45Q9NRW7 Y_RNA.594-201ENST00000410373 140 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 RN7SKP220-201ENST00000410611 288 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS45Q9NRW7 AL117339.3-201ENST00000418733 162 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 AL513043.1-201ENST00000439124 535 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 HIGD1AP2-201ENST00000446367 280 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 UQCRHP3-201ENST00000451503 251 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 ELOCP24-201ENST00000456370 334 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS45Q9NRW7 GZMAP1-201ENST00000503054 631 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 MTCYBP40-201ENST00000509390 1135 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 RNA5SP367-201ENST00000516557 118 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 ACA59.2-201ENST00000517061 156 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS45Q9NRW7 TRAV32-201ENST00000553993 340 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS45Q9NRW7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS45Q9NRW7 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 MIR7157-201ENST00000635801 60 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VPS45Q9NRW7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 MTND5P10-201ENST00000603719 1809 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 SNORA63-201ENST00000363450 132 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 SNORD42.2-201ENST00000365570 69 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 RNU6-898P-201ENST00000365627 104 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 RNU6-933P-201ENST00000384424 107 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 RNU6-310P-201ENST00000384655 107 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 RNA5SP274-201ENST00000410484 108 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 RNU6-325P-201ENST00000411132 105 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 USP9YP30-201ENST00000430729 455 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 DAP3P1-201ENST00000441522 278 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 AC013470.1-201ENST00000453438 462 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 Y_RNA.639-201ENST00000458981 102 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 AC097473.1-201ENST00000508142 408 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 AC093303.1-201ENST00000514549 295 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 RNU6-377P-201ENST00000515965 102 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 Y_RNA.670-201ENST00000516255 105 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 RN7SKP272-201ENST00000516988 232 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 AC009229.3-201ENST00000608056 282 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 U4.7-201ENST00000638126 106 ntBASIC3.12□□□□□ -1.91
VPS45Q9NRW7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS45Q9NRW7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS45Q9NRW7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS45Q9NRW7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS45Q9NRW7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS45Q9NRW7 RPL9P7-201ENST00000330965 580 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 Y_RNA.138-201ENST00000363462 102 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 RNU6-790P-201ENST00000384479 105 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 Y_RNA.646-201ENST00000410980 101 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS45Q9NRW7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS45Q9NRW7 MTCYBP6-201ENST00000441810 138 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 Z96811.1-201ENST00000445880 108 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS45Q9NRW7 MTCO3P10-201ENST00000455912 772 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 RPL9P9-202ENST00000466501 579 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.11□□□□□ -1.91
VPS45Q9NRW7 RNU5B-3P-201ENST00000516601 115 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 RNU6-1213P-201ENST00000517075 94 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.11□□□□□ -1.91
VPS45Q9NRW7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS45Q9NRW7 AC007536.1-201ENST00000533382 349 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 AC009314.1-201ENST00000603871 304 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 AL080274.1-201ENST00000605565 220 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
VPS45Q9NRW7 AC134503.1-201ENST00000633048 54 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 IGHVIII-44-202ENST00000636235 289 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 MIR3529-201ENST00000637713 78 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 AC009487.2-201ENST00000420969 6821 ntBASIC3.11□□□□□ -1.91
VPS45Q9NRW7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
VPS45Q9NRW7 RNU6-78P-201ENST00000362897 107 ntBASIC3.1□□□□□ -1.91
VPS45Q9NRW7 Y_RNA.128-201ENST00000363391 112 ntBASIC3.1□□□□□ -1.91
VPS45Q9NRW7 MIR627-201ENST00000384979 97 ntBASIC3.1□□□□□ -1.91
VPS45Q9NRW7 MIR147B-201ENST00000390185 80 ntBASIC3.1□□□□□ -1.91
VPS45Q9NRW7 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
VPS45Q9NRW7 RNA5SP184-201ENST00000411071 108 ntBASIC3.1□□□□□ -1.91
VPS45Q9NRW7 AL513477.1-202ENST00000417061 214 ntBASIC3.1□□□□□ -1.91
VPS45Q9NRW7 RPS15AP7-201ENST00000439294 405 ntBASIC3.1□□□□□ -1.91
VPS45Q9NRW7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms