Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC115990.1-201ENST00000526957 301 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 AP003072.1-201ENST00000531740 145 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 AC010653.1-201ENST00000571108 881 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.5□□□□□ -1.85
VTA1Q9NP79 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.5□□□□□ -1.85
VTA1Q9NP79 AP000560.1-201ENST00000624150 1937 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 AC110774.1-201ENST00000623567 2018 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
VTA1Q9NP79 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VTA1Q9NP79 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
VTA1Q9NP79 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
VTA1Q9NP79 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.49□□□□□ -1.85
VTA1Q9NP79 MIR30E-201ENST00000362104 92 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 MIR22-201ENST00000362190 85 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 Y_RNA.28-201ENST00000362554 111 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 U3.6-201ENST00000363622 211 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 RNU6-595P-201ENST00000363944 107 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 Y_RNA.473-201ENST00000384333 102 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 MIR147B-201ENST00000390185 80 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
VTA1Q9NP79 RN7SKP61-201ENST00000410642 295 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 NUP35P1-201ENST00000422734 947 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.49□□□□□ -1.85
VTA1Q9NP79 AL163540.1-201ENST00000485382 386 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 AP001025.1-201ENST00000486139 332 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 AC022447.4-201ENST00000504053 364 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.49□□□□□ -1.85
VTA1Q9NP79 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.49□□□□□ -1.85
VTA1Q9NP79 RN7SKP272-201ENST00000516988 232 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 SNORD116.3-201ENST00000517176 78 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 ELOCP31-201ENST00000540463 467 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.49□□□□□ -1.85
VTA1Q9NP79 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.49□□□□□ -1.85
VTA1Q9NP79 AC090897.2-201ENST00000581715 130 ntBASIC3.49□□□□□ -1.85
VTA1Q9NP79 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.49□□□□□ -1.85
VTA1Q9NP79 AC009541.1-201ENST00000438279 2662 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VTA1Q9NP79 MTND5P27-201ENST00000428871 1720 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VTA1Q9NP79 SNORD50.1-201ENST00000362987 71 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 RNY1P16-201ENST00000363063 111 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 CYCSP48-201ENST00000417124 323 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 AL358075.3-201ENST00000426289 226 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 GZMAP1-201ENST00000503054 631 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.48□□□□□ -1.85
VTA1Q9NP79 AC105137.2-201ENST00000569073 466 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 AC006504.6-201ENST00000590142 199 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.48□□□□□ -1.85
VTA1Q9NP79 AC137590.2-201ENST00000619709 240 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 AC091903.1-201ENST00000624322 454 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.48□□□□□ -1.85
VTA1Q9NP79 AP003122.5-201ENST00000527668 3766 ntBASIC3.48□□□□□ -1.85
VTA1Q9NP79 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
VTA1Q9NP79 MTND5P30-201ENST00000452896 1731 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 RBBP8P1-201ENST00000449447 1844 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VTA1Q9NP79 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 AC092268.1-201ENST00000342691 405 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
VTA1Q9NP79 Y_RNA.5-201ENST00000362334 102 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 RNU6-1010P-201ENST00000362757 107 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 Y_RNA.123-201ENST00000363338 102 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 SNORA5B-201ENST00000363786 132 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 RNU6-692P-201ENST00000384496 107 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 SNORD67-201ENST00000390833 111 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 RNU6-700P-201ENST00000391043 107 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 AC243428.1-201ENST00000421099 264 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 MTCYBP10-201ENST00000424905 650 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.47□□□□□ -1.85
VTA1Q9NP79 AC079354.2-201ENST00000453523 154 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 MIR2053-201ENST00000459295 91 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 AC016632.1-201ENST00000503994 196 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 RPL23AP94-201ENST00000512518 302 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 RNU7-4P-201ENST00000516961 62 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 CBX3P8-201ENST00000532412 525 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 ANP32BP3-201ENST00000559213 706 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.47□□□□□ -1.85
VTA1Q9NP79 AL355877.2-201ENST00000603670 358 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.47□□□□□ -1.85
VTA1Q9NP79 AL138825.1-201ENST00000618587 192 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 AC091925.1-201ENST00000623204 462 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 AC097372.5-201ENST00000623665 376 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 AC099654.7-201ENST00000635788 2127 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 AL365361.1-201ENST00000566942 3481 ntBASIC3.47□□□□□ -1.85
VTA1Q9NP79 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
VTA1Q9NP79 MAPK10-362ENST00000641864 4484 ntBASIC3.46□□□□□ -1.85
VTA1Q9NP79 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
VTA1Q9NP79 SNORD32A-201ENST00000364805 84 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 RNU6-1027P-201ENST00000383998 107 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 MIR544A-201ENST00000384855 91 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 RNU1-101P-201ENST00000391171 127 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 EEF1A1P41-201ENST00000414667 207 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 AL139132.1-201ENST00000431587 344 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.46□□□□□ -1.86
VTA1Q9NP79 RN7SL442P-201ENST00000473804 320 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 RPS4XP22-201ENST00000480755 780 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 AC104564.1-201ENST00000493028 407 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms