Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AC020895.1-201ENST00000595362 272 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 VN1R107P-201ENST00000601784 209 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AC005034.5-201ENST00000604219 466 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AC011890.2-201ENST00000613393 294 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 AC008669.1-201ENST00000565823 2178 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 SNORA22B-201ENST00000383876 138 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 RNU6-308P-201ENST00000390957 107 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 FTH1P15-201ENST00000406984 280 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 AC011816.1-201ENST00000441346 546 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 AC116655.1-201ENST00000508324 901 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 RNU6-612P-201ENST00000516909 102 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 AP005902.1-201ENST00000521358 186 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 AC006199.1-201ENST00000548728 219 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 CR383656.8-201ENST00000549046 145 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 MTCO3P13-201ENST00000577757 781 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 AC078795.3-201ENST00000602913 472 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 AC018889.1-201ENST00000605372 397 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 MIR8076-201ENST00000611401 83 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 AC091925.1-201ENST00000623204 462 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 AC004944.1-201ENST00000517807 3059 ntBASIC3.05□□□□□ -1.92
USP29Q9HBJ7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USP29Q9HBJ7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 Y_RNA.252-201ENST00000364556 101 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 RNU6-933P-201ENST00000384424 107 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 AL591034.2-201ENST00000402839 359 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 U8.21-201ENST00000459536 136 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 AC133134.1-201ENST00000466800 359 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 ACA59.1-201ENST00000515966 143 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 RNU6-581P-201ENST00000516214 105 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 RN7SKP272-201ENST00000516988 232 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 AC005899.2-201ENST00000584353 90 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 AL133393.1-201ENST00000603277 287 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 AC004832.5-201ENST00000608677 401 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 AL137790.1-201ENST00000634283 177 ntBASIC3.04□□□□□ -1.92
USP29Q9HBJ7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP29Q9HBJ7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.03□□□□□ -1.92
USP29Q9HBJ7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP29Q9HBJ7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP29Q9HBJ7 Y_RNA.28-201ENST00000362554 111 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 RNU6-490P-201ENST00000362985 107 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 SNORA5B-201ENST00000363786 132 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 RNA5SP139-201ENST00000364340 117 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 SNORA33.2-201ENST00000365413 134 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 Y_RNA.496-201ENST00000384444 101 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 SNORA26.7-201ENST00000391288 122 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 SAR1AP2-201ENST00000392696 594 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP29Q9HBJ7 MIR887-201ENST00000401258 79 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.03□□□□□ -1.92
USP29Q9HBJ7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.03□□□□□ -1.92
USP29Q9HBJ7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.03□□□□□ -1.92
USP29Q9HBJ7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP29Q9HBJ7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.03□□□□□ -1.92
USP29Q9HBJ7 AL035666.1-201ENST00000446195 348 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.03□□□□□ -1.92
USP29Q9HBJ7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.03□□□□□ -1.92
USP29Q9HBJ7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.03□□□□□ -1.92
USP29Q9HBJ7 FO393415.2-201ENST00000480085 343 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 MRPL42P6-201ENST00000486397 371 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 AC022447.4-201ENST00000504053 364 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 AC022493.2-201ENST00000506122 481 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 SNORA31.18-201ENST00000517043 134 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 RNU6-699P-201ENST00000517081 110 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 CBX3P8-201ENST00000532412 525 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 AC107016.2-201ENST00000547968 190 ntBASIC3.03□□□□□ -1.92
USP29Q9HBJ7 BNIP3P16-201ENST00000589779 534 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms