Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 MTND5P35-201ENST00000557537 1720 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 RNU1-140P-201ENST00000365040 165 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 SNORD6-201ENST00000365444 73 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 SNORA62-201ENST00000365493 153 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 Z98749.2-208ENST00000381646 500 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 SNORA36A-201ENST00000384221 132 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 Y_RNA.498-201ENST00000384460 102 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 RNU6-476P-201ENST00000384726 107 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 SNORA3C-201ENST00000408792 125 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 RNU2-54P-201ENST00000410299 190 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 RNA5SP306-201ENST00000411087 107 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 RPL27AP8-201ENST00000424277 446 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 GPM6BP3-201ENST00000442797 145 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 snoU13.6-201ENST00000458785 104 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 RAC1P5-201ENST00000512182 576 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 RNA5SP291-201ENST00000517222 105 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 FAM27D1-201ENST00000612308 341 ntBASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUCKS1Q9H1E3 MAPK10-373ENST00000641983 6772 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 RNU6-270P-201ENST00000364131 105 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 Y_RNA.337-201ENST00000365312 102 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 SNORA37-201ENST00000384504 129 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 SNRPEP9-201ENST00000436794 238 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 RPL23AP52-201ENST00000439311 478 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 AC009963.2-201ENST00000453431 138 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 HMGN2P7-201ENST00000456186 273 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 RPS23P7-201ENST00000466210 444 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 RN7SL303P-201ENST00000469773 251 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 RPL30P12-201ENST00000474666 353 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 PPIAP15-201ENST00000479662 484 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 Y_RNA.709-201ENST00000516952 92 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 CYCSP23-201ENST00000519781 313 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 TRAV8-5-201ENST00000537369 341 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 AC114781.5-201ENST00000615297 108 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NUCKS1Q9H1E3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 RNU1-14P-201ENST00000362759 152 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 RNU6-755P-201ENST00000364400 103 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 Y_RNA.329-201ENST00000365209 107 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 RNA5SP235-201ENST00000365411 114 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 AC068538.1-201ENST00000376856 336 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 RNU6-629P-201ENST00000384061 103 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 Y_RNA.525-201ENST00000384570 113 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 MIR518D-201ENST00000385014 87 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 MIR888-201ENST00000401186 77 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 ELOCP21-201ENST00000412558 336 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 AC009963.1-201ENST00000417265 157 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 RPL23AP46-201ENST00000438548 490 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 RNU7-107P-201ENST00000459121 61 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 RNU7-170P-201ENST00000459303 61 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 SNRPGP7-201ENST00000469016 106 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 AC109327.1-201ENST00000471666 403 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 RNA5SP54-201ENST00000516951 92 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 RNU4-60P-201ENST00000517239 135 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 AC109810.1-201ENST00000534066 224 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 HSPE1P4-201ENST00000550617 308 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 MED28P6-201ENST00000558776 231 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 AL360157.1-201ENST00000565962 87 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 AC068700.1-201ENST00000565862 3754 ntBASIC4.52□□□□□ -1.69
NUCKS1Q9H1E3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 AL139811.1-201ENST00000424779 2299 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 MIR423-201ENST00000362201 94 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms