Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC003989.2-201ENST00000440224 169 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AC132479.1-201ENST00000449160 144 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 C1DP4-201ENST00000455429 424 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AC074344.1-201ENST00000512823 224 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 Y_RNA.695-201ENST00000516715 107 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 RNU6-430P-201ENST00000517078 107 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AC018630.3-201ENST00000542637 96 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 MIR4703-201ENST00000577728 79 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AC091135.1-201ENST00000585943 307 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AC025449.1-201ENST00000603896 529 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AL136363.2-201ENST00000604173 851 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AC091834.1-201ENST00000614543 472 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AC063943.3-201ENST00000615562 356 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 AC009161.2-201ENST00000624626 138 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
POLR1EQ9GZS1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
POLR1EQ9GZS1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 SNORA75-201ENST00000384158 137 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 MIR597-201ENST00000384968 97 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 U8.13-201ENST00000390842 128 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 MIR1261-201ENST00000408659 82 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 RNU2-9P-201ENST00000410194 145 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 RNU6-1245P-201ENST00000411130 106 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 snoU13.26-201ENST00000459452 105 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 AP001893.2-201ENST00000526949 202 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 AC087752.4-201ENST00000605911 462 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 AC008945.2-201ENST00000606056 604 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 AC008147.4-201ENST00000617570 1204 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 Z69908.1-201ENST00000622603 247 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 Z69720.2-201ENST00000624755 279 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 AL390237.1-201ENST00000404226 1415 ntBASIC1.83□□□□□ -2.12
POLR1EQ9GZS1 RNU1-58P-201ENST00000362413 163 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 MIR544A-201ENST00000384855 91 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 SNORA40.18-201ENST00000391200 128 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 MIR1294-201ENST00000408503 142 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 SNORD56-201ENST00000413522 71 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 RPS15AP10-201ENST00000432472 382 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AC007969.2-201ENST00000441891 191 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 MTND1P18-201ENST00000448191 573 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AL122001.1-201ENST00000457027 370 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 RPS29P11-201ENST00000496507 171 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 ARL2BPP4-201ENST00000506854 471 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AP002963.1-201ENST00000530590 184 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 SUB1P2-201ENST00000556401 297 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AC119751.7-201ENST00000600494 245 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AC072046.2-201ENST00000618366 268 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AL159153.1-201ENST00000619688 317 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AC022079.1-201ENST00000621546 602 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AC005858.4-201ENST00000623191 700 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AC097372.5-201ENST00000623665 376 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 MIR3974-201ENST00000637126 96 ntBASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.82□□□□□ -2.12
POLR1EQ9GZS1 AC233981.2-201ENST00000611524 1614 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 Y_RNA.159-201ENST00000363674 87 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 Y_RNA.324-201ENST00000365165 102 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 AC090960.1-201ENST00000421072 306 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 EIF4EP2-201ENST00000422816 654 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 UBE2V1P4-201ENST00000425374 344 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 CBX3P6-201ENST00000430257 527 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 AL121890.1-201ENST00000435457 205 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 RPL7P54-201ENST00000438336 674 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 RPL21P99-201ENST00000480369 423 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 MTCO2P4-201ENST00000517968 247 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 AP005435.4-201ENST00000529514 284 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 MIR4713-201ENST00000582691 75 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 U4.7-201ENST00000638126 106 ntBASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
POLR1EQ9GZS1 AL356292.1-201ENST00000283110 373 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-37P-201ENST00000362692 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-11P-201ENST00000364234 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-234P-201ENST00000365229 104 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-25P-201ENST00000383873 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-1-201ENST00000383898 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-48P-201ENST00000384161 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-36P-201ENST00000384172 107 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms