Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC079140.2-201ENST00000506193 142 ntBASIC0.9□□□□□ -2.27
NKX6-2Q9C056 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
NKX6-2Q9C056 AC108078.1-201ENST00000508073 725 ntBASIC0.9□□□□□ -2.27
NKX6-2Q9C056 AC117522.1-201ENST00000509821 380 ntBASIC0.9□□□□□ -2.27
NKX6-2Q9C056 MTND3P5-201ENST00000512798 333 ntBASIC0.9□□□□□ -2.27
NKX6-2Q9C056 MTCO3P28-201ENST00000513351 515 ntBASIC0.9□□□□□ -2.27
NKX6-2Q9C056 RNU1-92P-201ENST00000517017 135 ntBASIC0.9□□□□□ -2.27
NKX6-2Q9C056 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.9□□□□□ -2.27
NKX6-2Q9C056 AP001893.2-201ENST00000526949 202 ntBASIC0.9□□□□□ -2.27
NKX6-2Q9C056 AC115990.1-201ENST00000526957 301 ntBASIC0.9□□□□□ -2.27
NKX6-2Q9C056 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.9□□□□□ -2.27
NKX6-2Q9C056 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.9□□□□□ -2.27
NKX6-2Q9C056 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC0.9□□□□□ -2.27
NKX6-2Q9C056 MIR5692A1-201ENST00000580523 69 ntBASIC0.9□□□□□ -2.27
NKX6-2Q9C056 HSPE1P19-201ENST00000603327 295 ntBASIC0.9□□□□□ -2.27
NKX6-2Q9C056 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.9□□□□□ -2.27
NKX6-2Q9C056 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.9□□□□□ -2.27
NKX6-2Q9C056 AC104010.1-201ENST00000616889 150 ntBASIC0.9□□□□□ -2.27
NKX6-2Q9C056 RNU5F-6P-201ENST00000362979 116 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 RNU6-105P-201ENST00000363909 104 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 RNU6-61P-201ENST00000365528 109 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 RNU6-1200P-201ENST00000384162 107 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 MIR558-201ENST00000384920 94 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 MIR634-201ENST00000385208 97 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.89□□□□□ -2.27
NKX6-2Q9C056 MED13P1-201ENST00000428342 171 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.89□□□□□ -2.27
NKX6-2Q9C056 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.89□□□□□ -2.27
NKX6-2Q9C056 AC027119.1-201ENST00000440877 241 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 AL133373.1-201ENST00000497098 94 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.89□□□□□ -2.27
NKX6-2Q9C056 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
NKX6-2Q9C056 AC087883.1-201ENST00000551882 391 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 AC091544.4-201ENST00000555268 342 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.89□□□□□ -2.27
NKX6-2Q9C056 SNORA59B-202ENST00000578183 701 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 AC023043.2-201ENST00000589678 1026 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 AC012507.3-201ENST00000603556 477 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 AC069114.2-201ENST00000604699 304 ntBASIC0.89□□□□□ -2.27
NKX6-2Q9C056 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.89□□□□□ -2.27
NKX6-2Q9C056 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
NKX6-2Q9C056 RNU4-91P-201ENST00000364778 135 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 RNU6-438P-201ENST00000365561 103 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 MIR520A-201ENST00000384862 85 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 RNU2-3P-201ENST00000410144 191 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 RNU6-1245P-201ENST00000411130 106 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.88□□□□□ -2.27
NKX6-2Q9C056 MTND1P30-201ENST00000441241 901 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AL009048.1-201ENST00000450437 298 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 MTCO2P29-201ENST00000465212 189 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 RPL30P7-201ENST00000479312 323 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 TRBV12-1-201ENST00000479785 344 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AC004223.1-201ENST00000479840 271 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AC104806.1-201ENST00000508720 308 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.88□□□□□ -2.27
NKX6-2Q9C056 SNORA3.4-201ENST00000515969 96 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 SNORA31.16-201ENST00000516773 139 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AL645939.4-201ENST00000604495 135 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AL355802.3-201ENST00000607571 545 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AC083806.3-201ENST00000614016 455 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 U4.7-201ENST00000638126 106 ntBASIC0.88□□□□□ -2.27
NKX6-2Q9C056 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.88□□□□□ -2.27
NKX6-2Q9C056 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.87□□□□□ -2.27
NKX6-2Q9C056 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
NKX6-2Q9C056 Y_RNA.22-201ENST00000362492 102 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 RNA5SP327-201ENST00000362494 101 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 SNORA32.2-201ENST00000384049 122 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 RNU6-331P-201ENST00000384724 107 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 SNORA12.2-201ENST00000391040 156 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 SNORD115.1-201ENST00000391109 76 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.87□□□□□ -2.27
NKX6-2Q9C056 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.87□□□□□ -2.27
NKX6-2Q9C056 AC245047.4-201ENST00000433189 144 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 AC099677.2-201ENST00000436385 175 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 AC243964.1-201ENST00000441814 261 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 DYNLT3P2-201ENST00000442517 295 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.87□□□□□ -2.27
NKX6-2Q9C056 OR2AQ1P-201ENST00000451972 200 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.87□□□□□ -2.27
NKX6-2Q9C056 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
NKX6-2Q9C056 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.87□□□□□ -2.27
NKX6-2Q9C056 AC098799.1-201ENST00000504752 800 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.87□□□□□ -2.27
NKX6-2Q9C056 AC112206.4-201ENST00000515142 405 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 RNU5A-4P-201ENST00000516588 111 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 RNU6-1220P-201ENST00000517126 108 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.87□□□□□ -2.27
NKX6-2Q9C056 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.87□□□□□ -2.27
NKX6-2Q9C056 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.87□□□□□ -2.27
NKX6-2Q9C056 ZNF321P-202ENST00000550843 495 ntBASIC0.87□□□□□ -2.27
NKX6-2Q9C056 AC109446.1-201ENST00000566172 220 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms