Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 MIR520C-201ENST00000385005 87 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 COX6CP13-201ENST00000428703 226 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 AP1B1P1-202ENST00000448124 191 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 RPL23AP42-201ENST00000471152 471 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 RN7SL563P-201ENST00000481233 298 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 AC006070.1-201ENST00000508151 193 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 RNA5SP271-201ENST00000516700 88 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 AC015688.6-201ENST00000577737 104 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 RN7SL311P-201ENST00000579858 306 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 AC093063.1-201ENST00000599317 363 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 AL355297.2-201ENST00000604792 129 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 AL136131.3-201ENST00000607600 188 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 AC006335.3-201ENST00000613408 292 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 MIR6749-201ENST00000617008 69 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 AC131280.1-202ENST00000624067 4211 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 AL662795.2-201ENST00000624252 3706 ntBASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-2Q9BYR7 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 NBPF8-201ENST00000583271 5330 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 AC010168.2-201ENST00000562691 5428 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 RNA5SP448-201ENST00000363151 111 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 RNA5SP472-201ENST00000363868 119 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 MIR654-201ENST00000385199 81 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 AC244023.1-201ENST00000426884 112 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 AC097359.1-201ENST00000447946 463 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 RN7SL376P-201ENST00000578594 264 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 AC005786.1-201ENST00000588553 154 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 AC242498.1-201ENST00000604134 111 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 MIR6776-201ENST00000616678 59 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 AC011471.4-201ENST00000638271 216 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 AL117339.4-201ENST00000608335 7063 ntBASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-2Q9BYR7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC3.28□□□□□ -1.89
KRTAP3-2Q9BYR7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 MIR30D-201ENST00000362283 70 ntBASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 RNU6-23P-201ENST00000363283 107 ntBASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 SNORA70.8-201ENST00000384231 136 ntBASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 RN7SL798P-201ENST00000468562 301 ntBASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 SNORA58-201ENST00000505219 137 ntBASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 RNA5SP445-201ENST00000515889 115 ntBASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 IGKV1D-22-201ENST00000518953 324 ntBASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 MIR4642-201ENST00000583943 82 ntBASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 RPSAP66-201ENST00000592196 606 ntBASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 AL161420.1-201ENST00000619393 264 ntBASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 MIR6754-201ENST00000621121 66 ntBASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-2Q9BYR7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-2Q9BYR7 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-2Q9BYR7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-2Q9BYR7 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-2Q9BYR7 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-2Q9BYR7 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-2Q9BYR7 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms