Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RTP3Q9BQQ7 AC063943.3-201ENST00000615562 356 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 RMST_7.1-201ENST00000621935 268 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
RTP3Q9BQQ7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
RTP3Q9BQQ7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RTP3Q9BQQ7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.56□□□□□ -2
RTP3Q9BQQ7 AC138393.1-203ENST00000327086 343 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-37P-201ENST00000362692 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-942P-201ENST00000363002 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-11P-201ENST00000364234 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 SNORD81.2-201ENST00000365153 76 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-1280P-201ENST00000365211 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-25P-201ENST00000383873 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-1-201ENST00000383898 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-48P-201ENST00000384161 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-36P-201ENST00000384172 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-4P-201ENST00000384205 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-5P-201ENST00000384238 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-3P-201ENST00000384314 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-16P-201ENST00000384385 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-15P-201ENST00000384534 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-2-201ENST00000384627 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-29P-201ENST00000384637 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-9-201ENST00000384776 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-33P-201ENST00000384793 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-750P-201ENST00000390946 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RAP1BP3-201ENST00000407180 549 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.56□□□□□ -2
RTP3Q9BQQ7 AL161651.1-201ENST00000440882 223 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 AC096638.1-201ENST00000444678 216 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 AC104389.3-201ENST00000445629 235 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 PPP1R2P5-201ENST00000457256 603 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RPL7P43-201ENST00000478876 753 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 CKS1BP2-201ENST00000497342 240 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.56□□□□□ -2
RTP3Q9BQQ7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.56□□□□□ -2
RTP3Q9BQQ7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.56□□□□□ -2
RTP3Q9BQQ7 AC026436.1-201ENST00000510537 270 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.56□□□□□ -2
RTP3Q9BQQ7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-273P-201ENST00000516937 96 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RN7SKP40-201ENST00000517211 242 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-323P-201ENST00000521915 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 AC004486.1-201ENST00000546846 233 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.56□□□□□ -2
RTP3Q9BQQ7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.56□□□□□ -2
RTP3Q9BQQ7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.56□□□□□ -2
RTP3Q9BQQ7 MIR3942-201ENST00000585264 109 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 AC091135.1-201ENST00000585943 307 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 RNU6-6P-201ENST00000606623 107 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 AC011890.2-201ENST00000613393 294 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 Y_RNA.804-201ENST00000615262 101 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 MIR1291-201ENST00000627649 87 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 AC010889.1-201ENST00000566193 2666 ntBASIC2.56□□□□□ -2
RTP3Q9BQQ7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
RTP3Q9BQQ7 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 Y_RNA.142-201ENST00000363491 102 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 RNU6-1009P-201ENST00000390996 107 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 RN7SKP32-201ENST00000410167 303 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 AL096701.2-201ENST00000416920 238 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.55□□□□□ -2
RTP3Q9BQQ7 RPL7P37-201ENST00000425095 738 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 AC092427.1-202ENST00000430569 476 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 SNRPEP8-201ENST00000442866 260 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 AP000705.1-201ENST00000454567 350 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.55□□□□□ -2
RTP3Q9BQQ7 RPL23AP42-201ENST00000471152 471 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.55□□□□□ -2
RTP3Q9BQQ7 RNU6-864P-201ENST00000516256 108 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 SNORD19.2-201ENST00000516978 73 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 AC069113.1-201ENST00000517763 267 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
RTP3Q9BQQ7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.55□□□□□ -2
RTP3Q9BQQ7 MIR3672-201ENST00000584290 82 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 AC091152.3-201ENST00000604227 325 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 AC016727.1-205ENST00000605437 569 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 RNU6-85P-201ENST00000605989 107 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 AC104237.2-201ENST00000612456 443 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.55□□□□□ -2
RTP3Q9BQQ7 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.55□□□□□ -2
RTP3Q9BQQ7 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 SCARNA4-202ENST00000625402 129 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 AL133216.2-202ENST00000634512 349 ntBASIC2.55□□□□□ -2
RTP3Q9BQQ7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RTP3Q9BQQ7 Y_RNA.301-201ENST00000364990 103 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 RNU1-109P-201ENST00000383960 147 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 FTH1P15-201ENST00000406984 280 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 RPL19P1-201ENST00000411635 428 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 SNORD56-201ENST00000413522 71 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 VN1R36P-201ENST00000414936 291 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 AC096649.2-201ENST00000416186 393 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.54□□□□□ -2
RTP3Q9BQQ7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.54□□□□□ -2
RTP3Q9BQQ7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.54□□□□□ -2
RTP3Q9BQQ7 MTND4LP16-201ENST00000440828 295 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms