Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 Y_RNA.19-201ENST00000362462 99 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 RNU5B-2P-201ENST00000363036 113 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 Y_RNA.105-201ENST00000363182 111 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 RNU6-770P-201ENST00000363929 105 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 SNORD115-32-201ENST00000364079 82 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 SNORA62.3-201ENST00000365110 153 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 RNU6-142P-201ENST00000384019 107 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 Y_RNA.461-201ENST00000384263 103 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 MIR487A-201ENST00000385009 80 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 PTMAP2-201ENST00000397627 327 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 HMGN2P7-201ENST00000456186 273 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 RN7SL542P-201ENST00000467147 294 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 AC016632.1-201ENST00000503994 196 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 AC022868.1-201ENST00000517767 391 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 HSPE1P20-201ENST00000538133 289 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 AC091152.3-201ENST00000604227 325 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 RMST_6.1-201ENST00000611980 203 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 AC130454.1-201ENST00000622948 401 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 AC091903.1-201ENST00000624322 454 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 HAUS6P2-201ENST00000433254 2404 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 AC010680.1-201ENST00000590024 3590 ntBASIC3.35□□□□□ -1.87
HIST1H2AJQ99878 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 AC233263.6-201ENST00000631132 1963 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 AL353743.1-202ENST00000431724 1695 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 Y_RNA.458-201ENST00000384240 102 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 MT-TW-201ENST00000387382 68 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 RN7SKP111-201ENST00000410349 271 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 RPS29P4-201ENST00000414733 161 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 AL356968.1-201ENST00000416622 474 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 AC245291.1-201ENST00000419501 328 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 PTGES3P4-201ENST00000426243 356 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 AP002884.2-201ENST00000471647 395 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 AP000870.1-201ENST00000472927 406 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 FCF1P8-201ENST00000510322 597 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 AL359198.2-201ENST00000611836 194 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 AL450472.1-202ENST00000637286 180 ntBASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.34□□□□□ -1.87
HIST1H2AJQ99878 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HIST1H2AJQ99878 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 Y_RNA.307-201ENST00000365022 117 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 Y_RNA.483-201ENST00000384380 101 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 RNY3P4-201ENST00000384428 101 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 RNU6-19P-201ENST00000384718 107 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 MIR153-2-201ENST00000385225 87 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 MT-TG-201ENST00000387429 68 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 PTMAP5-201ENST00000393073 333 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 UBA52P6-201ENST00000399822 382 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 RNA5SP390-201ENST00000410191 113 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 RN7SKP61-201ENST00000410642 295 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 AC244670.1-201ENST00000436879 112 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 AL031183.1-201ENST00000457667 207 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 snoU13.6-201ENST00000458785 104 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 CENPBD1P1-201ENST00000464061 469 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 AC107626.1-201ENST00000471084 183 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 AC025518.1-201ENST00000479856 347 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 RN7SL283P-201ENST00000489055 303 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 AC067942.3-201ENST00000512025 362 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 AC026403.1-201ENST00000518938 295 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 MIR5571-201ENST00000577998 113 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 AC062037.2-201ENST00000610137 73 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 MIR6798-201ENST00000612887 67 ntBASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HIST1H2AJQ99878 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HIST1H2AJQ99878 AP001148.1-201ENST00000624124 2359 ntBASIC3.32□□□□□ -1.88
HIST1H2AJQ99878 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.32□□□□□ -1.88
HIST1H2AJQ99878 MIR30E-201ENST00000362104 92 ntBASIC3.32□□□□□ -1.88
HIST1H2AJQ99878 RNU6-1301P-201ENST00000362724 104 ntBASIC3.32□□□□□ -1.88
HIST1H2AJQ99878 RNU6-487P-201ENST00000365430 104 ntBASIC3.32□□□□□ -1.88
HIST1H2AJQ99878 Y_RNA.376-201ENST00000365638 108 ntBASIC3.32□□□□□ -1.88
HIST1H2AJQ99878 U8.10-201ENST00000384260 133 ntBASIC3.32□□□□□ -1.88
HIST1H2AJQ99878 RNU6-611P-201ENST00000384276 104 ntBASIC3.32□□□□□ -1.88
HIST1H2AJQ99878 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HIST1H2AJQ99878 RNU6-121P-201ENST00000410525 99 ntBASIC3.32□□□□□ -1.88
HIST1H2AJQ99878 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.32□□□□□ -1.88
HIST1H2AJQ99878 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms