Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
NPAS1Q99742 AC073325.2-201ENST00000339545 159 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 OR56A5-201ENST00000340110 738 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 RNU6-1141P-201ENST00000364520 107 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 SNORD116-29-201ENST00000384516 83 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 AL591034.2-201ENST00000402839 359 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 BX276092.3-201ENST00000424182 230 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 SAR1AP4-201ENST00000429225 591 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.79□□□□□ -1.96
NPAS1Q99742 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.79□□□□□ -1.96
NPAS1Q99742 RPL23AP58-201ENST00000440453 469 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 AL353705.4-201ENST00000449661 238 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 MTCO3P10-201ENST00000455912 772 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 RN7SL20P-201ENST00000488827 297 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 AC016632.1-201ENST00000503994 196 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.79□□□□□ -1.96
NPAS1Q99742 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
NPAS1Q99742 SCARNA16.2-201ENST00000516520 172 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 RNU6-56P-201ENST00000516986 93 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 AC115990.1-201ENST00000526957 301 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 AL359198.2-201ENST00000611836 194 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 AC135507.2-201ENST00000612443 309 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 AC022140.2-201ENST00000623500 188 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.79□□□□□ -1.96
NPAS1Q99742 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
NPAS1Q99742 MTND5P9-201ENST00000503854 1755 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.79□□□□□ -1.96
NPAS1Q99742 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.79□□□□□ -1.96
NPAS1Q99742 AC233981.2-201ENST00000611524 1614 ntBASIC2.79□□□□□ -1.96
NPAS1Q99742 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS1Q99742 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NPAS1Q99742 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.78□□□□□ -1.96
NPAS1Q99742 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NPAS1Q99742 RNU6-529P-201ENST00000363383 104 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 RNU4-56P-201ENST00000364700 142 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 Y_RNA.315-201ENST00000365117 102 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 RNU6-596P-201ENST00000365395 98 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 RNU6-968P-201ENST00000384076 107 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 Y_RNA.579-201ENST00000390939 94 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 MIR1289-1-201ENST00000408836 144 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 RNU2-23P-201ENST00000410545 195 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.78□□□□□ -1.96
NPAS1Q99742 EIF1AXP1-201ENST00000419267 435 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.78□□□□□ -1.96
NPAS1Q99742 RPS29P27-201ENST00000463711 170 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 AC027575.1-201ENST00000481064 460 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 AC096576.1-201ENST00000489014 359 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS1Q99742 AC091874.1-201ENST00000511402 339 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 RNA5SP384-201ENST00000516615 116 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 SNORA70.24-201ENST00000517233 118 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 SCARNA11.3-201ENST00000517276 130 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS1Q99742 COX6CP5-201ENST00000527162 228 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.78□□□□□ -1.96
NPAS1Q99742 AC007318.2-201ENST00000620999 243 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 AL160413.1-201ENST00000622780 310 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NPAS1Q99742 GABRG2-229ENST00000641017 3628 ntBASIC2.78□□□□□ -1.96
NPAS1Q99742 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.78□□□□□ -1.96
NPAS1Q99742 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.78□□□□□ -1.97
NPAS1Q99742 MTND5P10-201ENST00000603719 1809 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPAS1Q99742 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
NPAS1Q99742 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
NPAS1Q99742 RNU6-1010P-201ENST00000362757 107 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 RNU6-486P-201ENST00000363116 107 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 Y_RNA.187-201ENST00000363918 113 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 Y_RNA.813-201ENST00000364639 102 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.77□□□□□ -1.97
NPAS1Q99742 RNU6-890P-201ENST00000384121 107 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 RNU1-57P-201ENST00000384491 166 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 Y_RNA.533-201ENST00000384596 114 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 SNORD15B-201ENST00000384714 146 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 MIR491-201ENST00000384877 84 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 SNORA11.1-201ENST00000408133 129 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 AC096664.2-201ENST00000411843 406 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.77□□□□□ -1.97
NPAS1Q99742 AL513477.1-202ENST00000417061 214 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 AL590135.1-201ENST00000422215 156 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 EIF4EP2-201ENST00000422816 654 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.77□□□□□ -1.97
NPAS1Q99742 AC019205.3-201ENST00000424573 156 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 AL353997.1-201ENST00000432936 108 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.77□□□□□ -1.97
NPAS1Q99742 AC016700.2-201ENST00000446011 156 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.77□□□□□ -1.97
NPAS1Q99742 AC140059.1-201ENST00000489238 361 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 AC015911.1-201ENST00000495111 156 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.77□□□□□ -1.97
NPAS1Q99742 RN7SKP272-201ENST00000516988 232 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPAS1Q99742 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.77□□□□□ -1.97
NPAS1Q99742 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.77□□□□□ -1.97
NPAS1Q99742 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.77□□□□□ -1.97
NPAS1Q99742 AC103810.1-201ENST00000579873 453 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 MIR3199-1-201ENST00000582434 88 ntBASIC2.77□□□□□ -1.97
NPAS1Q99742 AC010620.2-201ENST00000600135 313 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms