Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 ELOCP19-201ENST00000411919 318 ntBASIC3.9□□□□□ -1.79
CITED4Q96RK1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.9□□□□□ -1.79
CITED4Q96RK1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.9□□□□□ -1.79
CITED4Q96RK1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.9□□□□□ -1.79
CITED4Q96RK1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.9□□□□□ -1.79
CITED4Q96RK1 RPS17P2-201ENST00000461663 408 ntBASIC3.9□□□□□ -1.79
CITED4Q96RK1 RN7SL738P-201ENST00000470264 297 ntBASIC3.9□□□□□ -1.79
CITED4Q96RK1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.9□□□□□ -1.79
CITED4Q96RK1 AC008897.1-201ENST00000494006 347 ntBASIC3.9□□□□□ -1.79
CITED4Q96RK1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.9□□□□□ -1.79
CITED4Q96RK1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CITED4Q96RK1 RAC1P5-201ENST00000512182 576 ntBASIC3.9□□□□□ -1.79
CITED4Q96RK1 SCARNA17.1-201ENST00000516211 143 ntBASIC3.9□□□□□ -1.79
CITED4Q96RK1 SCARNA17.2-201ENST00000516334 143 ntBASIC3.9□□□□□ -1.79
CITED4Q96RK1 RNU5F-4P-201ENST00000516581 114 ntBASIC3.9□□□□□ -1.79
CITED4Q96RK1 AC015912.2-201ENST00000571053 181 ntBASIC3.9□□□□□ -1.79
CITED4Q96RK1 AC012603.1-201ENST00000606424 528 ntBASIC3.9□□□□□ -1.79
CITED4Q96RK1 SCARNA17.4-201ENST00000614296 143 ntBASIC3.9□□□□□ -1.79
CITED4Q96RK1 AC006133.1-201ENST00000617106 264 ntBASIC3.9□□□□□ -1.79
CITED4Q96RK1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CITED4Q96RK1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CITED4Q96RK1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CITED4Q96RK1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CITED4Q96RK1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.89□□□□□ -1.79
CITED4Q96RK1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CITED4Q96RK1 RNU1-75P-201ENST00000347264 129 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 RNA5SP322-201ENST00000363617 119 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 Y_RNA.217-201ENST00000364214 105 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 CD24P4-201ENST00000382840 243 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 RNU6-1083P-201ENST00000384022 107 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 RNU6-211P-201ENST00000384047 107 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 RNU1-89P-201ENST00000384592 164 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 RPL23AP26-201ENST00000412728 464 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 Y_RNA.641-201ENST00000459414 105 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 RNU6-436P-201ENST00000516171 114 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 RNU2-12P-201ENST00000517216 168 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.89□□□□□ -1.79
CITED4Q96RK1 AC072026.1-201ENST00000605023 201 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 AC011921.3-201ENST00000605540 361 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 RN7SL722P-201ENST00000617780 284 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 RN7SL565P-201ENST00000618246 284 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 AC091905.4-201ENST00000623432 202 ntBASIC3.89□□□□□ -1.79
CITED4Q96RK1 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
CITED4Q96RK1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.89□□□□□ -1.79
CITED4Q96RK1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.89□□□□□ -1.79
CITED4Q96RK1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CITED4Q96RK1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CITED4Q96RK1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.88□□□□□ -1.79
CITED4Q96RK1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CITED4Q96RK1 Y_RNA.262-201ENST00000364641 102 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 U8.12-201ENST00000384701 133 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 MIR192-201ENST00000384915 110 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 MIR591-201ENST00000385290 95 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 PCNPP3-201ENST00000393579 471 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 SNORD2.1-201ENST00000458762 69 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.88□□□□□ -1.79
CITED4Q96RK1 RNA5SP446-201ENST00000515955 82 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 MIR449C-201ENST00000516047 92 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 AP005660.1-201ENST00000522972 293 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.88□□□□□ -1.79
CITED4Q96RK1 AC010620.2-201ENST00000600135 313 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 AC002064.3-201ENST00000623448 346 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.88□□□□□ -1.79
CITED4Q96RK1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CITED4Q96RK1 INTS6P1-201ENST00000504674 2530 ntBASIC3.88□□□□□ -1.79
CITED4Q96RK1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CITED4Q96RK1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CITED4Q96RK1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CITED4Q96RK1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.88□□□□□ -1.79
CITED4Q96RK1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CITED4Q96RK1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.87□□□□□ -1.79
CITED4Q96RK1 AP001486.2-201ENST00000561652 5113 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 MIR423-201ENST00000362201 94 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 RNU6-486P-201ENST00000363116 107 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 RNA5SP123-201ENST00000363244 119 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 RNU6-682P-201ENST00000363843 106 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 MIR600-201ENST00000385007 98 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 MIR29B2-201ENST00000385055 81 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 HMGN2P8-201ENST00000391458 268 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 RNA5SP504-201ENST00000410676 117 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 Z75741.1-201ENST00000446793 314 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.87□□□□□ -1.79
CITED4Q96RK1 AC026784.1-201ENST00000507986 352 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 AC074198.2-201ENST00000508153 258 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 Y_RNA.662-201ENST00000516028 97 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 RAB9BP1-201ENST00000519581 626 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.87□□□□□ -1.79
CITED4Q96RK1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.87□□□□□ -1.79
CITED4Q96RK1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.87□□□□□ -1.79
CITED4Q96RK1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.87□□□□□ -1.79
CITED4Q96RK1 AC087783.2-201ENST00000605070 562 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 MIR378J-201ENST00000611988 109 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.87□□□□□ -1.79
CITED4Q96RK1 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.87□□□□□ -1.79
CITED4Q96RK1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CITED4Q96RK1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CITED4Q96RK1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CITED4Q96RK1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms