Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 AC012314.7-201ENST00000619693 93 ntBASIC4.13□□□□□ -1.75
HHIPQ96QV1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.13□□□□□ -1.75
HHIPQ96QV1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HHIPQ96QV1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
HHIPQ96QV1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HHIPQ96QV1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HHIPQ96QV1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.13□□□□□ -1.75
HHIPQ96QV1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HHIPQ96QV1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HHIPQ96QV1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HHIPQ96QV1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HHIPQ96QV1 AC092593.1-201ENST00000515413 1815 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HHIPQ96QV1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HHIPQ96QV1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.12□□□□□ -1.75
HHIPQ96QV1 MIR448-201ENST00000362131 111 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 RNU1-62P-201ENST00000362599 164 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 RNU6-1027P-201ENST00000383998 107 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 RNU6-211P-201ENST00000384047 107 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 Y_RNA.498-201ENST00000384460 102 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 MIR7-3-201ENST00000384898 110 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 RAB28P5-201ENST00000427490 651 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.12□□□□□ -1.75
HHIPQ96QV1 AC069285.2-201ENST00000440210 275 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 AL121594.1-201ENST00000475906 575 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 AC140059.1-201ENST00000489238 361 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 AC005840.1-201ENST00000498412 377 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 AC026726.1-201ENST00000512859 601 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 RNY3P16-201ENST00000516338 101 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.12□□□□□ -1.75
HHIPQ96QV1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.12□□□□□ -1.75
HHIPQ96QV1 AC021739.1-201ENST00000559631 174 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.12□□□□□ -1.75
HHIPQ96QV1 MIR3136-201ENST00000583498 78 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 MIR5684-201ENST00000585074 65 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 AL161756.2-201ENST00000604597 246 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 SNORA51-201ENST00000606420 132 ntBASIC4.12□□□□□ -1.75
HHIPQ96QV1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.12□□□□□ -1.75
HHIPQ96QV1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HHIPQ96QV1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HHIPQ96QV1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HHIPQ96QV1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HHIPQ96QV1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.12□□□□□ -1.75
HHIPQ96QV1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HHIPQ96QV1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HHIPQ96QV1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HHIPQ96QV1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.11□□□□□ -1.75
HHIPQ96QV1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.11□□□□□ -1.75
HHIPQ96QV1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HHIPQ96QV1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HHIPQ96QV1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HHIPQ96QV1 Y_RNA.121-201ENST00000363309 113 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 RNU4-56P-201ENST00000364700 142 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 MIR30B-201ENST00000384850 88 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 RNA5SP239-201ENST00000410218 129 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 RN7SKP156-201ENST00000410308 342 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 CYCSP48-201ENST00000417124 323 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 BPY2DP-201ENST00000422208 265 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 AC024067.1-201ENST00000426199 223 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 AC025445.1-201ENST00000502728 300 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.11□□□□□ -1.75
HHIPQ96QV1 RNA5SP154-201ENST00000516193 111 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 IGKV2D-19-201ENST00000523346 262 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.11□□□□□ -1.75
HHIPQ96QV1 CYP4A27P-201ENST00000567218 190 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HHIPQ96QV1 AC005520.5-201ENST00000613926 164 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.11□□□□□ -1.75
HHIPQ96QV1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.11□□□□□ -1.75
HHIPQ96QV1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HHIPQ96QV1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HHIPQ96QV1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HHIPQ96QV1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HHIPQ96QV1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.1□□□□□ -1.75
HHIPQ96QV1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.1□□□□□ -1.75
HHIPQ96QV1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HHIPQ96QV1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HHIPQ96QV1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HHIPQ96QV1 RNU6-1272P-201ENST00000362776 107 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 RNU4-80P-201ENST00000363200 141 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 RNU6-312P-201ENST00000364629 107 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 Y_RNA.272-201ENST00000364696 102 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 Y_RNA.571-201ENST00000384753 98 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 RNU2-54P-201ENST00000410299 190 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 SNORA57.3-201ENST00000411095 141 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.1□□□□□ -1.75
HHIPQ96QV1 RPL30P12-201ENST00000474666 353 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 RN7SKP289-201ENST00000517244 295 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.1□□□□□ -1.75
HHIPQ96QV1 AC055872.1-201ENST00000570978 278 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 snoU18.1-201ENST00000629629 71 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HHIPQ96QV1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.1□□□□□ -1.75
HHIPQ96QV1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HHIPQ96QV1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
HHIPQ96QV1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HHIPQ96QV1 AC011266.1-201ENST00000624119 3569 ntBASIC4.1□□□□□ -1.75
HHIPQ96QV1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms