Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNY3P5-201ENST00000384127 102 ntBASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-140P-201ENST00000384566 108 ntBASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 MIR450A2-201ENST00000385022 100 ntBASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 AL356095.1-201ENST00000417217 199 ntBASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 MIR378D2-201ENST00000580636 98 ntBASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 AC134878.1-201ENST00000619901 243 ntBASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 ZNF137P-201ENST00000456718 1920 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 MTND5P18-201ENST00000445624 1801 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 AP001273.1-201ENST00000624493 3152 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 RNA5SP124-201ENST00000362739 110 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-1285P-201ENST00000363480 105 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 Y_RNA.163-201ENST00000363702 113 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 RNU1-132P-201ENST00000364300 164 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 RN7SKP153-201ENST00000365026 316 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 SNORA36A-201ENST00000384221 132 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 RN7SKP267-201ENST00000410381 285 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 RPS26P42-201ENST00000413485 326 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 AC092047.1-201ENST00000424997 240 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 RPL37P4-201ENST00000448908 268 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 UBE2CP3-201ENST00000502715 450 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-1183P-201ENST00000517054 60 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-1073P-201ENST00000517182 106 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 CYCSP39-201ENST00000565821 309 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 MIR5195-201ENST00000583555 115 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 RPL30P11-203ENST00000598995 310 ntBASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CNTNAP3BQ96NU0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 AC022336.2-201ENST00000568966 2538 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 RNU1-108P-201ENST00000362556 161 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 Y_RNA.85-201ENST00000363014 111 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 SNORA51.5-201ENST00000384126 131 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 MIR589-201ENST00000385238 99 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 AL603914.1-201ENST00000401964 204 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 GPM6BP3-201ENST00000442797 145 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 snoU13.6-201ENST00000458785 104 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 RNU7-141P-201ENST00000459304 62 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 AL049873.1-201ENST00000480540 376 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 RPL30P5-201ENST00000494923 336 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 HSPE1P4-201ENST00000550617 308 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 MIR4724-201ENST00000579485 89 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 MIR8069-1-201ENST00000616627 86 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 AC009831.4-201ENST00000620744 325 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 MIR8069-2-201ENST00000621412 86 ntBASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNTNAP3BQ96NU0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CNTNAP3BQ96NU0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.4□□□□□ -1.7
CNTNAP3BQ96NU0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CNTNAP3BQ96NU0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.4□□□□□ -1.7
CNTNAP3BQ96NU0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CNTNAP3BQ96NU0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CNTNAP3BQ96NU0 SNORD45.3-201ENST00000363836 72 ntBASIC4.4□□□□□ -1.71
CNTNAP3BQ96NU0 SNORD115-30-201ENST00000364117 82 ntBASIC4.4□□□□□ -1.71
CNTNAP3BQ96NU0 Y_RNA.310-201ENST00000365063 113 ntBASIC4.4□□□□□ -1.71
CNTNAP3BQ96NU0 RNY1P7-201ENST00000384743 110 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms