Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 RNU6-884P-201ENST00000363889 107 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.376-201ENST00000365638 108 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 RNU6-611P-201ENST00000384276 104 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.483-201ENST00000384380 101 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 RNU6-847P-201ENST00000411115 108 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 CYCSP4-201ENST00000429682 331 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 USP9YP16-201ENST00000430287 407 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 RPEP5-201ENST00000441137 268 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 AC243964.1-201ENST00000441814 261 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 AL031659.1-201ENST00000447075 539 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 USP9YP23-201ENST00000455085 407 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 RNU6-397P-201ENST00000516226 104 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 MRPS36P4-201ENST00000534436 298 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 AL390123.1-201ENST00000603216 237 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 AL162713.1-201ENST00000604480 262 ntBASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.81□□□□□ -1.8
CHAMP1Q96JM3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 ZNF826P-207ENST00000622273 1910 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.447-201ENST00000384184 113 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.461-201ENST00000384263 103 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.518-201ENST00000384552 113 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 RNU6-713P-201ENST00000384761 107 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 RNU6-121P-201ENST00000410525 99 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 HMGN2P30-201ENST00000423237 256 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 Z82188.1-201ENST00000436709 154 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 AL513124.1-201ENST00000450410 614 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 SNORD127-201ENST00000458892 86 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 MTND1P19-201ENST00000511780 315 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 AC010928.2-201ENST00000588017 287 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 AC078899.3-201ENST00000599065 212 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 AC097372.5-201ENST00000623665 376 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 AC243829.7-201ENST00000633081 225 ntBASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.8□□□□□ -1.8
CHAMP1Q96JM3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 AL021368.2-201ENST00000606125 5352 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.19-201ENST00000362462 99 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.471-201ENST00000384312 102 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 U3.19-201ENST00000390893 196 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 BTF3L4P2-201ENST00000392798 346 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 AL358453.1-201ENST00000422522 250 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 HMGN2P16-201ENST00000456802 261 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 LINC01399-202ENST00000458450 244 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 U8.22-201ENST00000459141 133 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 RPS27AP10-201ENST00000496103 208 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 AC025465.3-201ENST00000510570 311 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 RNU6-388P-201ENST00000517012 105 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 RNU6-389P-201ENST00000517048 105 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 AC010186.2-204ENST00000537668 439 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 RPS29P30-201ENST00000600975 111 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 AC013412.1-201ENST00000610687 192 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 AL442067.1-201ENST00000613261 223 ntBASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CHAMP1Q96JM3 MFSD8-233ENST00000641482 4860 ntBASIC3.78□□□□□ -1.8
CHAMP1Q96JM3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CHAMP1Q96JM3 AC093831.2-201ENST00000624393 3427 ntBASIC3.78□□□□□ -1.8
CHAMP1Q96JM3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.27-201ENST00000362540 103 ntBASIC3.78□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.288-201ENST00000364854 92 ntBASIC3.78□□□□□ -1.8
CHAMP1Q96JM3 RNU1-100P-201ENST00000365255 165 ntBASIC3.78□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.358-201ENST00000365491 99 ntBASIC3.78□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.458-201ENST00000384240 102 ntBASIC3.78□□□□□ -1.8
CHAMP1Q96JM3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.78□□□□□ -1.8
CHAMP1Q96JM3 MIR490-201ENST00000384865 128 ntBASIC3.78□□□□□ -1.8
CHAMP1Q96JM3 MIR628-201ENST00000385229 95 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms