Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AC096996.1-201ENST00000563813 325 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC5□□□□□ -1.61
MS4A3Q96HJ5 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 RN7SL544P-201ENST00000617232 284 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 RN7SL763P-201ENST00000620922 284 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5□□□□□ -1.61
MS4A3Q96HJ5 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5□□□□□ -1.61
MS4A3Q96HJ5 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5□□□□□ -1.61
MS4A3Q96HJ5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MS4A3Q96HJ5 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MS4A3Q96HJ5 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MS4A3Q96HJ5 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MS4A3Q96HJ5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
MS4A3Q96HJ5 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MS4A3Q96HJ5 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 SNORA64.1-201ENST00000362600 132 ntBASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 SNORA7.2-201ENST00000364446 145 ntBASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 RNU6-411P-201ENST00000384451 107 ntBASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 CRIP1P1-201ENST00000427567 185 ntBASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 RPS26P39-201ENST00000469206 341 ntBASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 RPS17P15-201ENST00000475609 349 ntBASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 AL358944.1-201ENST00000528537 144 ntBASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 MIR3614-201ENST00000581261 86 ntBASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 MIR4310-201ENST00000582950 57 ntBASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 AP003122.5-201ENST00000527668 3766 ntBASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 AC022893.2-201ENST00000564832 3296 ntBASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
MS4A3Q96HJ5 AC026523.2-201ENST00000625039 7739 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 Y_RNA.57-201ENST00000362806 113 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 RNU4-32P-201ENST00000363404 141 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 RNA5SP455-201ENST00000365190 119 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 MIR522-201ENST00000385071 87 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 MIR130A-201ENST00000385274 89 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 RNA5SP91-201ENST00000390902 119 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 AL356387.2-201ENST00000422272 243 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 SNX2P2-201ENST00000424553 323 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 RNU6-1291P-201ENST00000516591 104 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 AC079598.5-201ENST00000547460 117 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 MAPK10-263ENST00000641052 4307 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 AL022311.1-201ENST00000623726 19416 ntBASIC4.98□□□□□ -1.61
MS4A3Q96HJ5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 RNU6-1163P-201ENST00000364516 107 ntBASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 MIR124-3-201ENST00000384866 87 ntBASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 HMGN2P31-201ENST00000432430 273 ntBASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 RPL36AP48-201ENST00000485521 314 ntBASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 AC023424.1-201ENST00000496058 459 ntBASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 AC021613.1-201ENST00000623880 111 ntBASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
MS4A3Q96HJ5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms