Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM43Q96BQ3 AC091564.4-201ENST00000533934 2194 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 RNU6-227P-201ENST00000362865 103 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 RNU6-1059P-201ENST00000363752 98 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 RNU6-487P-201ENST00000365430 104 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 BTF3L4P2-201ENST00000392798 346 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 RPL7P42-201ENST00000481005 679 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 RN7SL20P-201ENST00000488827 297 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 RNU6-307P-201ENST00000516743 106 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 SNORA31.23-201ENST00000517219 133 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 MIR4273-201ENST00000582824 84 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 MIR4719-201ENST00000585233 84 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 AC241585.2-209ENST00000638217 143 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 RBBP8P1-201ENST00000449447 1844 ntBASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM43Q96BQ3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 RNU1-112P-201ENST00000364401 164 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 RNU6-596P-201ENST00000365395 98 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 U8.8-201ENST00000365399 135 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 RNU6-310P-201ENST00000384655 107 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 SNORA67.4-201ENST00000384688 142 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 USMG5P1-201ENST00000425964 177 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 MTND1P14-201ENST00000427400 950 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 snoU13.26-201ENST00000459452 105 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 RAC1P5-201ENST00000512182 576 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 AC107016.2-201ENST00000547968 190 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 MIR4524B-201ENST00000581569 115 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 AP001836.1-201ENST00000604675 523 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 UCA1.1-201ENST00000620952 75 ntBASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM43Q96BQ3 AP003122.5-201ENST00000527668 3766 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 AC009487.2-201ENST00000420969 6821 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 Y_RNA.146-201ENST00000363549 102 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 RNU6-692P-201ENST00000384496 107 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 MIR504-201ENST00000385065 83 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 Y_RNA.646-201ENST00000410980 101 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 AP000275.1-201ENST00000411943 390 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 AL358075.3-201ENST00000426289 226 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 AC009414.1-201ENST00000427200 443 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 RPL23AP50-201ENST00000434149 455 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 AC243964.1-201ENST00000441814 261 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 RPS12P18-201ENST00000442381 270 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 OSTCP8-201ENST00000445117 448 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 RPS3P1-201ENST00000456781 192 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 AC097473.1-201ENST00000508142 408 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 RNU5B-3P-201ENST00000516601 115 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 TGIF1P1-201ENST00000558095 802 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 AC005899.2-201ENST00000584353 90 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 AC078795.3-201ENST00000602913 472 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 AC080078.3-201ENST00000605407 463 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 RNU6-91P-201ENST00000607774 107 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 AC107294.3-201ENST00000609211 526 ntBASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM43Q96BQ3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.15□□□□□ -1.9
TRIM43Q96BQ3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM43Q96BQ3 MTND5P10-201ENST00000603719 1809 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 RNA5SP68-201ENST00000363885 119 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 SNORA9.2-201ENST00000365361 133 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 RNU6-842P-201ENST00000384269 107 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 MIR544A-201ENST00000384855 91 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 Y_RNA.579-201ENST00000390939 94 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 AL591034.2-201ENST00000402839 359 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 RNA5SP390-201ENST00000410191 113 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 AF228730.4-201ENST00000421457 183 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 AC003685.2-201ENST00000422795 395 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 AC007969.2-201ENST00000441891 191 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 ELOCP24-201ENST00000456370 334 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 RNU7-152P-201ENST00000458982 64 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 CKS1BP7-201ENST00000522230 235 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 MTCO3P13-201ENST00000577757 781 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 AC096772.1-201ENST00000609146 564 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 AC090971.5-201ENST00000621102 293 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 AC064859.1-201ENST00000624741 174 ntBASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TRIM43Q96BQ3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms