Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AC016632.1-201ENST00000503994 196 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 AC026726.1-201ENST00000512859 601 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 SNORA40.9-201ENST00000515895 93 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 SNORA70.14-201ENST00000516205 110 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 Y_RNA.703-201ENST00000516846 111 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 MIR4282-201ENST00000583613 67 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 AC008749.1-201ENST00000597650 306 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 AL138880.2-201ENST00000616214 239 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 IGHVIII-44-202ENST00000636235 289 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 FAM35BP-202ENST00000497389 3337 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 SNORA25.1-201ENST00000362326 128 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 SNORD35B-201ENST00000363660 87 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 SNORD115-8-201ENST00000363856 82 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 SNORD74.4-201ENST00000364129 80 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 SNORD115-38-201ENST00000365037 82 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 RNU6-1035P-201ENST00000384477 107 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 Y_RNA.506-201ENST00000384494 102 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 MTCO2P33-201ENST00000402100 465 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 AL358075.3-201ENST00000426289 226 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 TBCAP1-201ENST00000436520 327 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 HMGN2P10-201ENST00000448085 265 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 PRSS3P4-201ENST00000453323 162 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 AC010469.1-201ENST00000463864 576 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 RPL29P14-201ENST00000495837 428 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 AC091959.1-201ENST00000495857 238 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 RPL7P47-201ENST00000497299 556 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 AC009163.5-201ENST00000575421 637 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 AC002076.2-201ENST00000617362 122 ntBASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VTI1AQ96AJ9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 RNU6-1140P-201ENST00000410517 106 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AC099548.1-201ENST00000421443 426 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AC069285.2-201ENST00000440210 275 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 MRPS10P1-201ENST00000448483 130 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 RN7SL271P-201ENST00000487601 295 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 CYCSP30-201ENST00000546447 172 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 MIR4474-201ENST00000579189 78 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AL161756.2-201ENST00000604597 246 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AL138963.2-201ENST00000605137 226 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AL359198.2-201ENST00000611836 194 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AL391261.4-201ENST00000616012 481 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AL590240.4-201ENST00000616908 390 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 MIR7151-201ENST00000617477 60 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AL034408.1-202ENST00000636088 415 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AC068254.2-201ENST00000623938 3577 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 AC007656.2-201ENST00000624902 4547 ntBASIC4.53□□□□□ -1.68
VTI1AQ96AJ9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.69
VTI1AQ96AJ9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 RNU6-873P-201ENST00000363833 107 ntBASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 MIR513A2-201ENST00000385249 127 ntBASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 Y_RNA.590-201ENST00000410140 107 ntBASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 RNU2-61P-201ENST00000411069 191 ntBASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 AC138623.1-201ENST00000418060 216 ntBASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 MTCO1P5-201ENST00000433573 344 ntBASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 RPL26P9-201ENST00000457466 433 ntBASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 CKS1BP7-201ENST00000522230 235 ntBASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 RPL21P9-201ENST00000556149 474 ntBASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 AC055872.1-201ENST00000570978 278 ntBASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 MIR5684-201ENST00000585074 65 ntBASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.52□□□□□ -1.69
VTI1AQ96AJ9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
VTI1AQ96AJ9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VTI1AQ96AJ9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms