| CLUAP1 | Q96AJ1 | AP000705.1-201 | ENST00000454567 | 350 nt | BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | GZMAP1-201 | ENST00000503054 | 631 nt | BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RNU6-496P-201 | ENST00000516145 | 99 nt | BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.673-201 | ENST00000516306 | 88 nt | BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | IGHVII-62-1-201 | ENST00000519283 | 235 nt | BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | DEFB108E-201 | ENST00000524692 | 240 nt | BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC023442.3-201 | ENST00000532199 | 495 nt | TSL 2 BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | MAPK1-204 | ENST00000544786 | 951 nt | TSL 1 (best) BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | UBL5P4-201 | ENST00000562584 | 236 nt | BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AP005271.1-201 | ENST00000582470 | 412 nt | TSL 3 BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AL078605.1-201 | ENST00000603529 | 500 nt | BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | SNORA62.6-201 | ENST00000606322 | 83 nt | BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC010999.1-201 | ENST00000611856 | 324 nt | BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AL354798.1-201 | ENST00000622505 | 329 nt | BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | DNAJC10-201 | ENST00000264065 | 20129 nt | APPRIS P1 TSL 1 (best) BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RNFT1-201 | ENST00000305783 | 2101 nt | APPRIS P1 TSL 1 (best) BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | DOCK7-218 | ENST00000635123 | 6297 nt | APPRIS ALT2 TSL 5 BASIC | 4.82 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | ATP13A3-203 | ENST00000439040 | 7720 nt | APPRIS P1 TSL 5 BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | ZNF266-204 | ENST00000590306 | 3317 nt | APPRIS P1 TSL 1 (best) BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | SOS1-202 | ENST00000402219 | 8314 nt | APPRIS P2 TSL 1 (best) BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RPAP3-202 | ENST00000380650 | 2149 nt | TSL 1 (best) BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | NLGN1-206 | ENST00000457714 | 8242 nt | APPRIS P1 TSL 1 (best) BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RNA5SP361-201 | ENST00000362686 | 118 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RNU6-290P-201 | ENST00000365212 | 101 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RNU6-926P-201 | ENST00000384075 | 107 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RNU6-1001P-201 | ENST00000411265 | 100 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AL139247.1-201 | ENST00000422768 | 325 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AL353743.2-202 | ENST00000439544 | 473 nt | TSL 3 BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | snoU13.6-201 | ENST00000458785 | 104 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC117462.1-201 | ENST00000461186 | 554 nt | TSL 4 BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | LINC01969-201 | ENST00000514468 | 455 nt | TSL 3 BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | MIR2114-201 | ENST00000516645 | 80 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | SNORA31.16-201 | ENST00000516773 | 139 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RN7SKP209-201 | ENST00000516888 | 304 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | VN1R85P-201 | ENST00000601587 | 426 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | SNRPGP20-201 | ENST00000604477 | 205 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC073657.2-201 | ENST00000605661 | 303 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | BX284668.6-201 | ENST00000606899 | 438 nt | BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AL138686.1-201 | ENST00000612699 | 315 nt | TSL 3 BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | BCLAF1-213 | ENST00000530767 | 4186 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | OR9G4-203 | ENST00000641581 | 2603 nt | APPRIS P1 BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | SYT14-208 | ENST00000637265 | 13567 nt | TSL 5 BASIC | 4.81 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | ADAM29-211 | ENST00000514159 | 3010 nt | APPRIS P1 TSL 4 BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | LRFN5-204 | ENST00000554171 | 4253 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | SNORA53-201 | ENST00000391141 | 249 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | U3.26-201 | ENST00000391236 | 204 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC078851.1-201 | ENST00000415918 | 298 nt | TSL 3 BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC121342.1-201 | ENST00000423914 | 550 nt | TSL 3 BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AL590422.1-201 | ENST00000451829 | 364 nt | TSL 3 BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC012081.1-201 | ENST00000462382 | 477 nt | TSL 3 BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC105389.2-201 | ENST00000506475 | 435 nt | TSL 3 BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC074133.1-201 | ENST00000515696 | 183 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RNU5F-2P-201 | ENST00000516066 | 82 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.700-201 | ENST00000516806 | 100 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC008011.1-201 | ENST00000545989 | 227 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC087499.8-201 | ENST00000578406 | 226 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | MIR4286-201 | ENST00000580651 | 93 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | MIR4423-201 | ENST00000580922 | 80 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AL034555.1-201 | ENST00000604816 | 211 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC037487.3-201 | ENST00000606668 | 112 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC244205.2-202 | ENST00000635781 | 342 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | MS4A1-212 | ENST00000534668 | 3475 nt | APPRIS P1 TSL 2 BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | MAPK10-373 | ENST00000641983 | 6772 nt | BASIC | 4.8 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | ERBB4-203 | ENST00000402597 | 11699 nt | TSL 1 (best) BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | CEP57L1-223 | ENST00000523787 | 2522 nt | APPRIS ALT2 TSL 5 BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | ADGRG7-202 | ENST00000475887 | 2035 nt | TSL 2 BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RNA5SP502-201 | ENST00000362694 | 119 nt | BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | SNORD6-201 | ENST00000365444 | 73 nt | BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | MT-TR-201 | ENST00000387439 | 65 nt | BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | SNORD58.1-201 | ENST00000391313 | 66 nt | BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | SNORA11-201 | ENST00000408789 | 128 nt | BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.602-201 | ENST00000410535 | 92 nt | BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AL136097.2-201 | ENST00000457003 | 333 nt | TSL 2 BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC073901.1-201 | ENST00000462471 | 408 nt | BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RPL26P26-201 | ENST00000480251 | 434 nt | BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.683-201 | ENST00000516508 | 93 nt | BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | LINC02309-201 | ENST00000553679 | 207 nt | TSL 3 BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC004147.3-201 | ENST00000577709 | 375 nt | TSL 3 BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC127459.3-201 | ENST00000624328 | 466 nt | BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | PREPL-207 | ENST00000409957 | 4703 nt | TSL 5 BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | DDX60L-209 | ENST00000511577 | 6781 nt | APPRIS P1 TSL 5 BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | PROS1-203 | ENST00000407433 | 3335 nt | TSL 1 (best) BASIC | 4.79 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | USH2A-201 | ENST00000307340 | 18883 nt | APPRIS P1 TSL 1 (best) BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | ZNF439-201 | ENST00000304030 | 2622 nt | APPRIS P1 TSL 1 (best) BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | GLMN-201 | ENST00000370360 | 1995 nt | APPRIS P1 TSL 1 (best) BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | PTER-201 | ENST00000298942 | 3448 nt | TSL 5 BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | CRISPLD1-205 | ENST00000523524 | 2100 nt | TSL 2 BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | IL33-202 | ENST00000417746 | 2327 nt | TSL 2 BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | PPP1R9A-208 | ENST00000456331 | 10090 nt | TSL 1 (best) BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | APCS-201 | ENST00000255040 | 926 nt | APPRIS P1 TSL 1 (best) BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RNU6-873P-201 | ENST00000363833 | 107 nt | BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AIF1-202 | ENST00000376049 | 524 nt | TSL 1 (best) BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | SNORA3.3-201 | ENST00000408712 | 125 nt | BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | NDUFB1P1-201 | ENST00000435191 | 180 nt | BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC117440.1-201 | ENST00000474107 | 571 nt | BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AC137770.1-201 | ENST00000504620 | 530 nt | TSL 3 BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | RN7SKP83-201 | ENST00000516512 | 178 nt | BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AL160262.1-201 | ENST00000522264 | 254 nt | TSL 3 BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | AL162713.1-201 | ENST00000604480 | 262 nt | BASIC | 4.78 | □□□□□ -1.64 | | |
| CLUAP1 | Q96AJ1 | SPTY2D1-AS1-205 | ENST00000635674 | 450 nt | APPRIS ALT2 TSL 2 BASIC | 4.78 | □□□□□ -1.64 | | |